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L1_007_000M1_scaffold_1042

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_1042_1
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..290)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q4P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30715.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Domain of unknown function (DUF955).
L1_007_000M1_scaffold_1042_2
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(303..665)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QIH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30716.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L1_007_000M1_scaffold_1042_3
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(812..1618)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R8C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30717.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L1_007_000M1_scaffold_1042_4
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1615..1848)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q1W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30718.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L1_007_000M1_scaffold_1042_5
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1845..5627)
DNA (3783bp) protein (1261aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LXP4_9FIRM
Domain of unknown function (DUF955).
Uncharacterized protein {ECO:0000313|EMBL:CBL22397.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L1_007_000M1_scaffold_1042_6
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5572..5985)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NGJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79127.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L1_007_000M1_scaffold_1042_7
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5975..6436)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72008.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_000M1_scaffold_1042_8
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6501..15056)
DNA (8556bp) protein (2852aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N833_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79126.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
DNA methylase
L1_007_000M1_scaffold_1042_9
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15071..15595)
DNA (525bp) protein (175aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Clostridium sp. ASF502 RepID=N2A5V4_9CLOT
L1_007_000M1_scaffold_1042_10
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15592..17124)
DNA (1533bp) protein (511aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Clostridium sp. ASF502 RepID=N2A5V4_9CLOT
L1_007_000M1_scaffold_1042_11
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17196..17846)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A2M2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ23592.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L1_007_000M1_scaffold_1042_12
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17839..18069)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G8S5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46079.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L1_007_000M1_scaffold_1042_13
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18081..20093)
DNA (2013bp) protein (671aa)
NlpC/P60 family protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CB65_9CLOT
NlpC/P60 family protein {ECO:0000313|EMBL:EFE12947.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
NLP/P60 protein
L1_007_000M1_scaffold_1042_14
unknown

Not on your lists

comp(20113..20433)
DNA (321bp) protein (107aa)

This feature has no annotations

L1_007_000M1_scaffold_1042_15
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20430..21413)
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=root RepID=B0G8S8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46082.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L1_007_000M1_scaffold_1042_16
unknown

Not on your lists

22064..22438
DNA (375bp) protein (125aa)

This feature has no annotations

L1_007_000M1_scaffold_1042_17
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22677..23255
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E4X8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83827.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L1_007_000M1_scaffold_1042_18
Bifidobacterium boum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23335..24786)
DNA (1452bp) protein (484aa)
MobA/MobL family protein {ECO:0000313|EMBL:KFI47081.1}; EC=5.99.1.2 {ECO:0000313|EMBL:KFI47081.1};; TaxID=78343 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium boum.;"
Uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=R9MWP5_9FIRM
hypothetical protein
L1_007_000M1_scaffold_1042_19

Not on your lists

comp(24922..25236)
DNA (315bp) protein (105aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1T926_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC55841.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_1042_20
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25373..27202)
DNA (1830bp) protein (610aa)
hypothetical protein n=1 Tax=Paenibacillus sp. JC66 RepID=UPI00028A14EF
Uncharacterized protein {ECO:0000313|EMBL:EOS30901.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_000M1_scaffold_1042_21
unknown

Not on your lists

comp(27249..27428)
DNA (180bp) protein (60aa)

This feature has no annotations

L1_007_000M1_scaffold_1042_22
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27425..29065)
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JXL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38944.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
traE protein
L1_007_000M1_scaffold_1042_23
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29052..29420)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N726_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79119.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L1_007_000M1_scaffold_1042_24
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29499..30371)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9B3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90690.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L1_007_000M1_scaffold_1042_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30574..32238)
DNA (1665bp) protein (555aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6N3_9FIRM
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL00496.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_000M1_scaffold_1042_26
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32245..32442)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=D4C9V4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE13566.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L1_007_000M1_scaffold_1042_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32684..33976)
DNA (1293bp) protein (431aa)
Predicted P-loop ATPase and inactivated derivatives n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6N1_9FIRM
Predicted P-loop ATPase and inactivated derivatives
Predicted P-loop ATPase and inactivated derivatives {ECO:0000313|EMBL:CBL00494.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_000M1_scaffold_1042_28
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33990..34631)
DNA (642bp) protein (214aa)
CHC2 zinc finger domain protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C9V2_9CLOT
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EFE13564.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
DNA primase
L1_007_000M1_scaffold_1042_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34695..36284)
DNA (1590bp) protein (530aa)
Plasmid mobilization system relaxase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6N0_9FIRM
Plasmid mobilization system relaxase {ECO:0000313|EMBL:CBL00493.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
plasmid mobilization system relaxase
L1_007_000M1_scaffold_1042_30
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36649..37305)
DNA (657bp) protein (219aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C9U9_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFE13561.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
Displaying items 1-30 of 47 in total

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