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L1_007_000M1_scaffold_2004

Search features with annotation key words

Displaying items 31-40 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_2004_31
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(36623..37327)
DNA (705bp) protein (235aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRV5_9FIRM
L1_007_000M1_scaffold_2004_32
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(37543..39432)
DNA (1890bp) protein (630aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRV6_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
glucose-inhibited division protein A
L1_007_000M1_scaffold_2004_33
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(39586..40983)
DNA (1398bp) protein (466aa)
Putative tRNA modification GTPase TrmE (Fragment) n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRV9_9FIRM
Putative tRNA modification GTPase TrmE {ECO:0000313|EMBL:EFB74569.1}; Flags: Fragment;; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
tRNA modification GTPase TrmE
L1_007_000M1_scaffold_2004_34
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(41035..43446)
DNA (2412bp) protein (804aa)
Alpha-glucuronidase Gh115A n=1 Tax=Clostridium sp. CAG:62 RepID=R7C512_9CLOT
Alpha-glucuronidase Gh115A {ECO:0000313|EMBL:CDD73186.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
gh115A; alpha-glucuronidase
L1_007_000M1_scaffold_2004_35

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comp(43592..45028)
DNA (1437bp) protein (479aa)
Polysaccharide biosynthesis protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TZB4_9ZZZZ
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EKC71480.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L1_007_000M1_scaffold_2004_36

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comp(45275..45838)
DNA (564bp) protein (188aa)
Metal-dependent hydrolase n=1 Tax=human gut metagenome RepID=K1SWU7_9ZZZZ
Metal-dependent hydrolase {ECO:0000313|EMBL:EKC65062.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Predicted metal-dependent hydrolase
L1_007_000M1_scaffold_2004_37
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(46235..47104)
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSQ0_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFB74283.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
rhaS; AraC-type sugar metabolism regulator
L1_007_000M1_scaffold_2004_38
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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47293..48909
DNA (1617bp) protein (539aa)
Mannitol dehydrogenase domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSP8_9FIRM
Mannitol dehydrogenase domain protein {ECO:0000313|EMBL:EFB74281.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
mannitol dehydrogenase domain-containing protein
L1_007_000M1_scaffold_2004_39
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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49005..50102
DNA (1098bp) protein (366aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
D-mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PYV5_9FIRM
L1_007_000M1_scaffold_2004_40
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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comp(50764..51039)
DNA (276bp) protein (92aa)
Transcription regulator phage-related protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TQ07_9STAP
Transcription regulator phage-related protein {ECO:0000313|EMBL:CDC71889.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
helix-turn-helix domain-containing protein
Displaying items 31-40 of 40 in total

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