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L1_007_000M1_scaffold_2004_33

Organism: dasL1_007_000M1_concoct_30_fa

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38
Location: comp(39586..40983)

Top 3 Functional Annotations

Value Algorithm Source
Putative tRNA modification GTPase TrmE (Fragment) n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRV9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 391.0
  • Bit_score: 599
  • Evalue 1.70e-168
Putative tRNA modification GTPase TrmE {ECO:0000313|EMBL:EFB74569.1}; Flags: Fragment;; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 391.0
  • Bit_score: 599
  • Evalue 2.40e-168
tRNA modification GTPase TrmE similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 465.0
  • Bit_score: 562
  • Evalue 8.40e-158

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1398
ATGAGTTCTACTATTTGCGCCCTTGCCACCCCGCCGGGGGCAGGCGGCATTGCGGTCGTTCGGGTATCCGGACCGGAAGCGTATGCGGTGGTGGGGGAGATCTTCACCCCGTGCAACCCGGCAAAGCGGGTTGCGGAAGCCAAAGGCTACACCGCCATGCTGGGGCATTACCATCTGCGGGGTGAGGAGATGGATGAGACCATCGCCCTGTTTTTCCGCGCGCCGCATAGCTACACTGGTGAGGATGTGATCGAGCTTTCAGTCCACGGCGGCAACGCCATGGCCCAGGGCCTGCTGGAAGCGCTGTACCTGGCCGGTGCTGCGCCCGCCGGCCCCGGCGAGTTTACCCGCCGCGCACTGGAAAACGGCCGCATGAGCCTGACCCAGGCCGAAGCCGTGATGGAGATCATCTCCGCCGAAGGGCGGCAGGGGGCAGCGCTGGCAAAGTCCGCTTTGGACGGCGCGCTGGCACGGCGCATTGCGGGCATCCAGGCCGCTTTGCAAACGCTGGCTGCCCACCTGACCGCCTGGATTGACTACCCGGAGGAGGATGTACCGGAGGTATCGCAGGCAGAGCTGATCGCCACACTGAGCGAGCAGAAGGACACGCTGGACCAGCTGATTGCCGGGTACGGGGCCGGGGCGGTTTTGCGCCGCGGGGTGGACTGTGTGCTGCTGGGCCGCCCCAATGTGGGCAAAAGCACCCTGCTGAACCTGCTGGCCGGGTTTGACCGCGCCATTGTGACCCCCATTGCGGGCACCACCCGCGATGTGCTGGAGCAGGCCGTGATGCTGGGGGATACCGGCATCCGGCTGAACCTGTTTGACACCGCCGGTGTGCGGGATGTGGGGGAACACGGCGATGCTGTGGAAGCCGAGGGCATCCGCCGCAGCTGGAAAAAGCTGGAGGAAGCCGGGCTGGTGCTGGCCGTGTTCGACCTGGCCGCCCCGCTGAATGAGGAAGACCTGGAAATTGCACGCCGCTGCCAGGGCCGCCCTGCGCTGGCCATCCTGAACAAGCAGGATCTAGCCGGGCAGGGGGAAGCATTCACTGCCGCACAGCAGCAGTTAGCGCCTTACTTCAAGGCCATCATTCCGCTGACCGCGCGGGACGCCGCCAGCCTGCAGCCTTTGTGTCAGGCGGTCGCCCAACTGCTGGGCACCGCCAACCTGGACCCCAACGCTGCCGCGCTGTGCAGCGCCCGCCAGCTGAGCGCCGCCAAGGAAGCCCGCGATGCCTTGGCCGAAGCCCTGAGCAGCCAGGAGGACGGCTTTGGGCTGGATGCTGCTGGGGTGTGCATCAGCGATGCGCAGCGTGCCCTTGCCCGCCTGACCGGCGAGGACGCCACCGAAGCCACCATTGACGAAGTGTTTTCTACCTTCTGTGTGGGCAAATAA
PROTEIN sequence
Length: 466
MSSTICALATPPGAGGIAVVRVSGPEAYAVVGEIFTPCNPAKRVAEAKGYTAMLGHYHLRGEEMDETIALFFRAPHSYTGEDVIELSVHGGNAMAQGLLEALYLAGAAPAGPGEFTRRALENGRMSLTQAEAVMEIISAEGRQGAALAKSALDGALARRIAGIQAALQTLAAHLTAWIDYPEEDVPEVSQAELIATLSEQKDTLDQLIAGYGAGAVLRRGVDCVLLGRPNVGKSTLLNLLAGFDRAIVTPIAGTTRDVLEQAVMLGDTGIRLNLFDTAGVRDVGEHGDAVEAEGIRRSWKKLEEAGLVLAVFDLAAPLNEEDLEIARRCQGRPALAILNKQDLAGQGEAFTAAQQQLAPYFKAIIPLTARDAASLQPLCQAVAQLLGTANLDPNAAALCSARQLSAAKEARDALAEALSSQEDGFGLDAAGVCISDAQRALARLTGEDATEATIDEVFSTFCVGK*