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L1_007_000M1_scaffold_166_76

Organism: dasL1_007_000M1_concoct_78_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(60089..60616)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SUG5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 175.0
  • Bit_score: 350
  • Evalue 8.70e-94
Sigma-70 region 2 {ECO:0000313|EMBL:CDC64888.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 175.0
  • Bit_score: 350
  • Evalue 1.20e-93
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 172.0
  • Bit_score: 96
  • Evalue 4.90e-18

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Taxonomy

Ruminococcus sp. CAG:57 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 528
ATGCTTGGCGTGTGTATGGCATTGATCGATGATGAAAAAGATAAAAAGGCTTTTGAAAAGCTGTATAATAAATACAAAAATAAAGTTCATGCAATATCCTTGAATATATTAAAAAATGAACAACTTGCTGAGGAATCAACTTCTGACACTTTTTTATCGTTGGCTAAATGTTTTCAAAAAATTAAACATTTAGAATATCACAAATTGGATTATTACATTGTCATAACTAGTAGGAACATGGCAAAGAATATATCTAAAAAGGAAAAAGAAAATTTAATGACGGTTTCCTACGATGATGATTCTTATTTTGTAAATGAAAATATGTCATGTTACGAATTTGAATTTTTGAAAGGTTGCATAAAGAAACTGAAAGTTGACGATCAAGAGATTCTTTATTTAAAGTTTTCGTGTGGACTTGAATATTCTGAAATCTCAAAAACGCTTGGCATTACATCTGCCACAGCAAGAAAACGTCTGCAGTATGCCAAAAACAGATTGAAGATATTACTTGAAAAGGGTGATTTATAA
PROTEIN sequence
Length: 176
MLGVCMALIDDEKDKKAFEKLYNKYKNKVHAISLNILKNEQLAEESTSDTFLSLAKCFQKIKHLEYHKLDYYIVITSRNMAKNISKKEKENLMTVSYDDDSYFVNENMSCYEFEFLKGCIKKLKVDDQEILYLKFSCGLEYSEISKTLGITSATARKRLQYAKNRLKILLEKGDL*