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L1_007_000M1_scaffold_166

Search features with annotation key words

Displaying items 61-90 of 143 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_166_61
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44299..46641
DNA (2343bp) protein (781aa)
von Willebrand factor type A domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9A8_9FIRM
von Willebrand factor type A domain protein {ECO:0000313|EMBL:CDC66294.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_166_62
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46705..47232)
DNA (528bp) protein (176aa)
Nitroreductase family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCM1_9FIRM
Nitroreductase family protein {ECO:0000313|EMBL:CDC67449.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_166_63
unknown

Not on your lists

47350..47529
DNA (180bp) protein (60aa)

This feature has no annotations

L1_007_000M1_scaffold_166_64
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47850..49481
DNA (1632bp) protein (544aa)
Peptide chain release factor 3 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T347_9FIRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
prfC; Peptide chain release factor 3
L1_007_000M1_scaffold_166_65
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49652..51205
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO06074.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_166_66
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51379..52098
DNA (720bp) protein (240aa)
cwlD; germination-specific N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Germination-specific N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CCO06075.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CCO06075.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6K8_9FIRM
L1_007_000M1_scaffold_166_67
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52261..52473
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8R4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67182.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_166_68
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52525..53763)
DNA (1239bp) protein (413aa)
Transposase TnpA n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SUE7_9FIRM
Transposase TnpA {ECO:0000313|EMBL:CDC64873.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
tnpA1; transposase for insertion sequence element IS1001
L1_007_000M1_scaffold_166_69
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53905..54759)
DNA (855bp) protein (285aa)
ABC transporter ATPase component (EC:3.6.3.-)
ABC transporter ATPase component {ECO:0000313|EMBL:CCO04944.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO04944.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ABC transporter related n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAK3_9FIRM
L1_007_000M1_scaffold_166_70
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54774..55868)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SUF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC64883.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_166_71
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55868..57067)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T549_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC64884.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_166_72
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57094..58296)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SY17_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04941.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_73
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58316..58750)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAL2_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04940.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_74
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58879..59304)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KY29_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04939.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_75
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(59410..60087)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U207_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CDC64887.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_166_76
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60089..60616)
DNA (528bp) protein (176aa)
Sigma-70 region 2 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SUG5_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:CDC64888.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ECF subfamily RNA polymerase sigma-24 subunit
L1_007_000M1_scaffold_166_77
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

60881..63655
DNA (2775bp) protein (925aa)
Protein translocase subunit SecA n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TJ30_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
secA; preprotein translocase subunit SecA
L1_007_000M1_scaffold_166_78
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63724..64986
DNA (1263bp) protein (421aa)
Uncharacterized conserved protein UCP033563 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAP6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06078.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_79
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65051..66220
DNA (1170bp) protein (390aa)
ce; cellobiose 2-epimerase (EC:5.1.3.11)
Cellobiose 2-epimerase {ECO:0000256|HAMAP-Rule:MF_00929, ECO:0000313|EMBL:CCO06079.1}; Short=CE {ECO:0000256|HAMAP-Rule:MF_00929};; EC=5.1.3.11 {ECO:0000256|HAMAP-Rule:MF_00929, ECO:0000313|EMBL:CCO06079.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Cellobiose 2-epimerase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T352_9FIRM
L1_007_000M1_scaffold_166_80
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

66220..66918
DNA (699bp) protein (233aa)
PHP domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDS7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06080.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_81
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66969..67538)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6L1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06081.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_82
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

67735..68928
DNA (1194bp) protein (398aa)
celB; Cellulase (Glycoside Hydrolase Family 5 protein ) (EC:3.2.1.4)
Cellulase (Glycoside Hydrolase Family 5 protein ) {ECO:0000313|EMBL:CCO06082.1}; EC=3.2.1.4 {ECO:0000313|EMBL:CCO06082.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Endoglucanase B n=1 Tax=Ruminococcus albus RepID=GUNB_RUMAL
L1_007_000M1_scaffold_166_83
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(69240..69674)
DNA (435bp) protein (145aa)
hypothetical protein (EC:2.3.1.-)
FR47-like protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5F9_9FIRM
FR47-like protein {ECO:0000313|EMBL:CDC64989.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_166_84
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(69679..70602)
DNA (924bp) protein (308aa)
nadA; Quinolinate synthase (EC:2.5.1.72)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027, ECO:0000313|EMBL:CCO06084.1}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027, ECO:0000313|EMBL:CCO06084.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Quinolinate synthetase complex A subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SUU6_9FIRM
L1_007_000M1_scaffold_166_85
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

70817..71260
DNA (444bp) protein (148aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2E0_9FIRM
Transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CCO06085.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_86
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

71281..73812
DNA (2532bp) protein (844aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N3H1_9FIRM
Acyltransferase {ECO:0000313|EMBL:CCO06086.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
acyltransferase
L1_007_000M1_scaffold_166_87
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

74183..74893
DNA (711bp) protein (237aa)
Amino acid ABC transporter membrane protein PAAT family (TC 3.A.1.3.-) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5F2_9FIRM
amino acid ABC transport system membrane component
Amino acid ABC transport system membrane component {ECO:0000313|EMBL:CCO06087.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_88
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

74905..75666
DNA (762bp) protein (254aa)
amino acid ABC transporter ATPase component (EC:3.6.3.-)
Amino acid ABC transporter ATPase component {ECO:0000313|EMBL:CCO06088.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO06088.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Amino acid ABC transporter ATP-binding protein PAAT family (TC 3.A.1.3.-) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2D4_9FIRM
L1_007_000M1_scaffold_166_89
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

75873..76751
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYB9_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06089.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_90
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

77002..77871
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SUS8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06090.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying items 61-90 of 143 in total

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