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L1_007_000M1_scaffold_166

Search features with annotation key words

Displaying items 1-30 of 143 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_166_1
unknown

Not on your lists

242..421
DNA (180bp) protein (60aa)

This feature has no annotations

L1_007_000M1_scaffold_166_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

366..1091
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U609_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06059.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1088..1273)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66283.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_166_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1508..3259
DNA (1752bp) protein (584aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
dxs2; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
Putative 1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T997_9FIRM
L1_007_000M1_scaffold_166_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3276..3812
DNA (537bp) protein (179aa)
wrbA; hypothetical protein (EC:1.7.-.-)
Multimeric flavodoxin WrbA n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T257_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO06062.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3918..4208
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66286.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_166_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4323..4514)
DNA (192bp) protein (64aa)
Helix-turn-helix domain-containing protein n=1 Tax=Brevibacillus agri BAB-2500 RepID=L5MUW7_9BACL
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06272.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4582..5319)
DNA (738bp) protein (246aa)
dam; DNA adenine methylase (EC:2.1.1.72)
DNA adenine methylase {ECO:0000313|EMBL:CCO06273.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CCO06273.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FC82_9CLOT
L1_007_000M1_scaffold_166_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5381..5608)
DNA (228bp) protein (76aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06274.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5620..6495)
DNA (876bp) protein (292aa)
Glycosyl hydrolase family 25 n=1 Tax=Ruminococcus albus 8 RepID=E9SCJ9_RUMAL
endolysin (Glycoside Hydrolase Family 25 protein )
Endolysin (Glycoside Hydrolase Family 25 protein ) {ECO:0000313|EMBL:CCO06275.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6479..6691)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6D5X6_9FIRM
putative holin
Putative holin {ECO:0000313|EMBL:CCO06276.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_12
unknown

Not on your lists

comp(6697..7371)
DNA (675bp) protein (225aa)

This feature has no annotations

L1_007_000M1_scaffold_166_13
unknown

Not on your lists

comp(7386..8048)
DNA (663bp) protein (221aa)

This feature has no annotations

L1_007_000M1_scaffold_166_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8048..8257)
DNA (210bp) protein (70aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06278.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8250..8831)
DNA (582bp) protein (194aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06279.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8842..10002)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T895_9FIRM
hypothetical phage protein
Hypothetical phage protein {ECO:0000313|EMBL:CCO06280.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10014..10382)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U566_9FIRM
hypothetical phage protein
Hypothetical phage protein {ECO:0000313|EMBL:CCO06281.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10393..13356)
DNA (2964bp) protein (988aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N652_9FIRM
putative minor tail protein
Putative minor tail protein {ECO:0000313|EMBL:CCO06282.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13433..14110
DNA (678bp) protein (226aa)
Ribosomal L7/L12 C-terminal domain protein n=11 Tax=Clostridium difficile RepID=T2YQY2_CLODI
hypothetical phage protein
Hypothetical phage protein {ECO:0000313|EMBL:CCO06283.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_20
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14143..14700)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T147_9FIRM
hypothetical phage protein
Hypothetical phage protein {ECO:0000313|EMBL:CCO06284.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14697..15191)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L516_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06285.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_22
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15235..15738)
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L515_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06286.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_23
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15739..16137)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SXG5_SYNGF
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06287.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16154..16525)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Helcococcus kunzii ATCC 51366 RepID=H3NPC9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06288.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_25
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16522..16848)
DNA (327bp) protein (109aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06289.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16849..17169)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JQ07_CELLD
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06290.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_27
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17173..17409)
DNA (237bp) protein (79aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06291.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_28
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17421..18308)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5ADI8_9FIRM
phage major capsid protein
Phage major capsid protein {ECO:0000313|EMBL:CCO06292.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_29
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18329..18865)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5FAP8_9FIRM
phage minor structural protein
Phage minor structural protein {ECO:0000313|EMBL:CCO06293.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_30
unknown

Not on your lists

comp(18996..19136)
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying items 1-30 of 143 in total

View Taxonomy