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L1_007_000M1_scaffold_166

Search features with annotation key words

Displaying items 121-143 of 143 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_166_121
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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107475..108161
DNA (687bp) protein (229aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SY68_9FIRM
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
sfsA; Sugar fermentation stimulation protein homolog
L1_007_000M1_scaffold_166_122
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

108206..109384
DNA (1179bp) protein (393aa)
Stage II sporulation protein P n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T599_9FIRM
spoIIP; Stage II sporulation protein P
Stage II sporulation protein P {ECO:0000313|EMBL:CCO06122.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_123
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

109557..110948
DNA (1392bp) protein (464aa)
NLP/P60 protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SUM4_9FIRM
NLP/P60 protein {ECO:0000313|EMBL:CDC64933.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_166_124
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

111165..111431
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U265_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06124.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_125
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

111864..112541
DNA (678bp) protein (226aa)
Putative heme response regulator HssR n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T591_9FIRM
Two-component system transcriptional regulator
Two-component system transcriptional regulator {ECO:0000313|EMBL:CCO06125.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_126
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

112621..113898
DNA (1278bp) protein (426aa)
Two-component system sensor histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U257_9FIRM
L1_007_000M1_scaffold_166_127
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(114015..114866)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SY56_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06127.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_128
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(115045..116367)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SUL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC64923.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_166_129
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(116360..117316)
DNA (957bp) protein (319aa)
ABC transporter ATPase component (EC:3.6.3.-)
ABC transporter ATPase component {ECO:0000313|EMBL:CCO06129.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO06129.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ABC transporter related protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SY51_9FIRM
L1_007_000M1_scaffold_166_130
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(117309..118106)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T581_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06130.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_131
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(118324..119991)
DNA (1668bp) protein (556aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ptsI2; Phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAP4_9FIRM
L1_007_000M1_scaffold_166_132
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

120248..120937
DNA (690bp) protein (230aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcus albus 8 RepID=E9S7A2_RUMAL
sigK; RNA polymerase sigma-K factor (sporulation-specific)
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_133
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

121212..121628
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDI7_9FIRM
hsp20; Heat shock protein Hsp20
Uncharacterized protein {ECO:0000313|EMBL:CDC67754.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_166_134
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(121750..122244)
DNA (495bp) protein (165aa)
VanZ family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2T0_9FIRM
VanZ family protein {ECO:0000313|EMBL:CDC67753.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_166_135
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(122204..123607)
DNA (1404bp) protein (468aa)
cca; tRNA nucleotidyltransferase (CCA-adding enzyme) (EC:2.7.7.72)
tRNA nucleotidyltransferase (CCA-adding enzyme) {ECO:0000313|EMBL:CCO06135.1}; EC=2.7.7.72 {ECO:0000313|EMBL:CCO06135.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
HDIG domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAC4_9FIRM
L1_007_000M1_scaffold_166_136
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

123617..125044
DNA (1428bp) protein (476aa)
lnt; Apolipoprotein N-acyltransferase (EC:2.3.1.-)
Apolipoprotein N-acyltransferase {ECO:0000256|SAAS:SAAS00250216, ECO:0000313|EMBL:CCO06136.1}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00088950, ECO:0000313|EMBL:CCO06136.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Apolipoprotein N-acyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIR4_9FIRM
L1_007_000M1_scaffold_166_137
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(125051..127162)
DNA (2112bp) protein (704aa)
Alpha-galactosidase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6B7_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:CDC67750.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Glycoside Hydrolase Family 36 protein
L1_007_000M1_scaffold_166_138
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(127213..128406)
DNA (1194bp) protein (398aa)
coaBC; Phosphopantothenoyl cysteine decarboxylase / phosphopantothenate--cysteine ligase (bifunctional enzyme ) (EC:4.1.1.36)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDI1_9FIRM
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:CDC67749.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L1_007_000M1_scaffold_166_139
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(128675..130435)
DNA (1761bp) protein (587aa)
Dockerin type I repeat protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2S6_9FIRM
D-alanyl-D-alanine carboxypeptidase domain containing protein {ECO:0000313|EMBL:CCO06139.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
D-alanyl-D-alanine carboxypeptidase domain containing protein
L1_007_000M1_scaffold_166_140
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

131042..131491
DNA (450bp) protein (150aa)
Large-conductance mechanosensitive channel n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAB9_9FIRM
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
mscL; Large-conductance mechanosensitive channel
L1_007_000M1_scaffold_166_141
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

131535..133415
DNA (1881bp) protein (627aa)
AMP-binding enzyme n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TIQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO06141.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
hypothetical protein
L1_007_000M1_scaffold_166_142
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

133440..134033
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6A9_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06142.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_143
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

134576..135004
DNA (429bp) protein (143aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Streptococcus agalactiae 515 RepID=Q3DIA6_STRAG
restriction endonuclease subunit S
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EHJ36041.1}; TaxID=1002367 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
Displaying items 121-143 of 143 in total

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