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L1_007_000M1_scaffold_166

Search features with annotation key words

Displaying items 31-60 of 143 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_166_31
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19187..19447)
DNA (261bp) protein (87aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06294.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_32
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19459..21129)
DNA (1671bp) protein (557aa)
Minor capsid 2 protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPK1_CELLD
Phage minor capsid protein (Glycoside Hydrolase Family 25 protein ) {ECO:0000313|EMBL:CCO06295.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Phage minor capsid protein (Glycoside Hydrolase Family 25 protein )
L1_007_000M1_scaffold_166_33
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21129..22589)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SXF6_SYNGF
phage portal protein
Phage portal protein {ECO:0000313|EMBL:CCO06296.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_34
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22586..23962)
DNA (1377bp) protein (459aa)
Phage terminase, large subunit, PBSX family n=1 Tax=Anaerococcus hydrogenalis ACS-025-V-Sch4 RepID=F0H2C8_9FIRM
phage terminase, large subunit
Phage terminase, large subunit {ECO:0000313|EMBL:CCO06297.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_35
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23946..24413)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7A4Y0_9FIRM
phage terminase, small subunit
Phage terminase, small subunit {ECO:0000313|EMBL:CCO06298.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_36
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24655..25137)
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CG44_9FIRM
nusG; Transcription antitermination protein NusG
Transcription antitermination protein NusG {ECO:0000313|EMBL:CCO06299.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_37
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25134..25682)
DNA (549bp) protein (183aa)
PF11985 family protein n=1 Tax=Eubacteriaceae bacterium OBRC8 RepID=J5UB62_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06300.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_38
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25695..26021)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7B0B7_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06301.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_39
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26023..26319)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:379 RepID=R6ZXV2_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06302.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_40
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26420..26779)
DNA (360bp) protein (120aa)
Mor transcription activator family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6Z8_9FIRM
possible positive regulator of late transcription
Possible positive regulator of late transcription {ECO:0000313|EMBL:CCO06303.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_41
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26721..27248)
DNA (528bp) protein (176aa)
Voltage-dependent P/Q-type calcium channel subunit alpha-1A n=1 Tax=Clostridium sp. CAG:964 RepID=R6VAP3_9CLOT
hypothetical phage protein
Hypothetical phage protein {ECO:0000313|EMBL:CCO06304.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_42
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27267..27917)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6UCG1_9CLOT
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06305.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_43
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27904..28164)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FCC1_9CLOT
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06306.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_44
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28428..28625)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K8A7_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06307.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_45
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28650..29573)
DNA (924bp) protein (308aa)
AAA domain protein n=2 Tax=Ruminococcus RepID=R7FFF2_9FIRM
B; DNA transposition protein
DNA transposition protein {ECO:0000313|EMBL:CCO06308.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_46
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29577..31595)
DNA (2019bp) protein (673aa)
Integrase core domain protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FEX2_9FIRM
MU-like transposase {ECO:0000313|EMBL:CCO06309.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
A; MU-like transposase
L1_007_000M1_scaffold_166_47
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31644..31847)
DNA (204bp) protein (68aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06310.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_48
unknown

Not on your lists

comp(31844..32098)
DNA (255bp) protein (85aa)

This feature has no annotations

L1_007_000M1_scaffold_166_49
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32571..32798)
DNA (228bp) protein (76aa)
XRE family transcriptional regulator n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2LGC9_9GAMM
XRE family transcriptional regulator {ECO:0000313|EMBL:EPC03726.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
XRE family transcriptional regulator
L1_007_000M1_scaffold_166_50
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32761..32994)
DNA (234bp) protein (78aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06311.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_51
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33007..33459)
DNA (453bp) protein (151aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06312.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_52
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33676..34353
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MLD2_9FIRM
Putative bacteriophage repressor protein CI
Putative bacteriophage repressor protein CI {ECO:0000313|EMBL:CCO06313.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_53
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34927..35241
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEI9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06063.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_54
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35675..36604)
DNA (930bp) protein (310aa)
Transporter auxin efflux carrier (AEC) family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U612_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06064.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_55
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36889..37797
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYL6_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO06065.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_56
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37861..38406
DNA (546bp) protein (182aa)
CBS domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T9A2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06066.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_007_000M1_scaffold_166_57
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38433..39566
DNA (1134bp) protein (378aa)
dacC; D-alanyl-D-alanine carboxypeptidase (pbp 5/6) (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase (Pbp 5/6) {ECO:0000313|EMBL:CCO06067.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CCO06067.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T261_9FIRM
L1_007_000M1_scaffold_166_58
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39817..40470)
DNA (654bp) protein (218aa)
HAD hydrolase family IA variant 3 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEJ5_9FIRM
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDC66291.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_007_000M1_scaffold_166_59
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40648..41358
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U616_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66292.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_000M1_scaffold_166_60
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41426..44047
DNA (2622bp) protein (874aa)
ATP-dependent chaperone ClpB n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYM2_9FIRM
clpB; Chaperone protein ClpB
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034, ECO:0000313|EMBL:CCO06070.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying items 31-60 of 143 in total

View Taxonomy