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L1_007_000M1_scaffold_30_44

Organism: dasL1_007_000M1_concoct_78_fa

near complete RP 48 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(56178..57764)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR system CASCADE complex protein CasA n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KD29_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 547.0
  • Bit_score: 640
  • Evalue 1.30e-180
CRISPR system CASCADE complex protein CasA {ECO:0000313|EMBL:ERJ96446.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 547.0
  • Bit_score: 640
  • Evalue 1.80e-180
CRISPR-associated protein, Cse1 family similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 551.0
  • Bit_score: 434
  • Evalue 2.30e-119

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Taxonomy

Ruminococcus callidus → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1587
ATGAACGAAACAGAGTTTAATCTGCTTGATGAGCCGTGGATAAGAGTAATGGACGACAATTGTCAAATAAAAGAGGTGTCACTAACAGATGCACTTTTGAATGCGCATAAGTATAAGGCTCTGAAAGGTGAAATGCCTACGCAGGATATAGTTATACTTCGTCTTATGCTTGCCATAGTGCATACTGTCTTTTCAAGGGTAGATGCCGACGGCAATGAAGCAGAGCTAGAGGAAGAGGACGATGCGGTGGATAGGTGGGAAAGCCTATGGAACAACCGAAAGATTCCCGAAAAGCCCATGAGAGAGTATTTTGAAAAGTGGCATGAACGCTTTTGGCTCTTTCATCCCGAAAGACCATTTGGGCAAATGGCCGGGCTGACTTATGGCACAGAATATGGTGCGTCAAAGCTTAATGGCGAGATATCAGAAAGTGGCAACAAAACTAGGATATTTTCTGCATATTCAGGCGAACAGAAAAGCCACCTTACATATGCTCAGGCGGCTAGGTGGCTTTTGACTTTAATTTCATTTGATGATTCAGCAATAAAGCCCTCAAAGGAGGGAAAAGAGAAAGCTGGTGGTAAGCTTCCTCCGTCTGGTGTTGGTTGGCTTGGAAAATTAGGGTTAGTTTATTTGAATGGCAGTAACTTTTTTGAAACGATTATGCTTAATTTTGTACTAATTAATAATGATAATATTGAATGTGATGAACAACCAATGTGGGAAATGGATGATCCTGTAAAAGAAGAACGTAGGGAAATACCTTATCCGACCAATCTTGCACAGCTTTATACGTTACAGTCTCGACACATTTTGCTAAATAGATGTGGCGATAAAATAATGGGATATATTGCTATTAGGGGAGATTCTTTTACTGATAAGAACGCATTTATAGAACCCATGACAACATGGAAAATAAATAAGACTGATTATTTACCAAAGAAACATTGTGCGTCGGAACAGATGTGGCGTGAGTTTTCTAATATTTATAATAATTCTAATGGTAATCATGTTCCTGGGGTTATAAAGTGGTTTAAATTCATATCAACAAAGGTAAAACTACCTATGATGAGGACTACCGTGTTGTCTGTAGACTATGATAAAAATAATTGTAGCATACAGAATGTTTTCGGTGATTCCTTAGAAATGAACGCACAAATACTATCAGAAGTAGGCAGGGGTTATCGTGAAGAAATAAAGTTTGAGATAAGCAGATGTGAAGAACTTGCGAAAAAAATAGGCAATCTAGCATGGAATATTTACCTTGCCTCTGGTGGAAATAAGAACAGTAAGCCAAAGGACATTGGCTCGATTTTAGACGCCAAGTCACAGCTATACTACCGCCTTGATATTCCTTTCCGCAGTTGGCTTTCTTCACTTGACCCGGAAAATGATGATAAGCTGGAAAAGTTTGAACAGTGGCAGAATACTGCAAAGAGGATAACCCTTGATCTTGGTAGGGAGCTTGTTGCGGCAGTAGATGATACTGCAATGGTGGGACATATGATAGATGAGACGATCTATTCTGCACCAAAGGCTTACAACATTTTCTTGCGTGATGTTTCAAAGATATATCAGAAAATTTAA
PROTEIN sequence
Length: 529
MNETEFNLLDEPWIRVMDDNCQIKEVSLTDALLNAHKYKALKGEMPTQDIVILRLMLAIVHTVFSRVDADGNEAELEEEDDAVDRWESLWNNRKIPEKPMREYFEKWHERFWLFHPERPFGQMAGLTYGTEYGASKLNGEISESGNKTRIFSAYSGEQKSHLTYAQAARWLLTLISFDDSAIKPSKEGKEKAGGKLPPSGVGWLGKLGLVYLNGSNFFETIMLNFVLINNDNIECDEQPMWEMDDPVKEERREIPYPTNLAQLYTLQSRHILLNRCGDKIMGYIAIRGDSFTDKNAFIEPMTTWKINKTDYLPKKHCASEQMWREFSNIYNNSNGNHVPGVIKWFKFISTKVKLPMMRTTVLSVDYDKNNCSIQNVFGDSLEMNAQILSEVGRGYREEIKFEISRCEELAKKIGNLAWNIYLASGGNKNSKPKDIGSILDAKSQLYYRLDIPFRSWLSSLDPENDDKLEKFEQWQNTAKRITLDLGRELVAAVDDTAMVGHMIDETIYSAPKAYNIFLRDVSKIYQKI*