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L1_007_000M1_scaffold_315

Search features with annotation key words

Displaying items 31-60 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_315_31
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46548..47027
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6TJP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC58962.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
L1_007_000M1_scaffold_315_32
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47014..47805
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R6SN49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC58959.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
prepilin peptidase
L1_007_000M1_scaffold_315_33
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47855..49066
DNA (1212bp) protein (404aa)
Bacterial type II secretion system domain protein F n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MCL0_9FIRM
Bacterial type II secretion system domain protein F {ECO:0000313|EMBL:EDR97680.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
putative type II secretion pathway protein XcpS
L1_007_000M1_scaffold_315_34
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49089..49982
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KGD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34208.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Tfp pilus assembly protein, ATPase
L1_007_000M1_scaffold_315_35
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50023..50589
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R6SG65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC58955.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
L1_007_000M1_scaffold_315_36
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50601..51344
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GQ31_EUBLK
Uncharacterized protein {ECO:0000313|EMBL:ADO39080.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_007_000M1_scaffold_315_37
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51341..53029
DNA (1689bp) protein (563aa)
Type II/IV secretion system protein n=2 Tax=Anaerostipes RepID=B0MCL3_9FIRM
Type II/IV secretion system protein {ECO:0000313|EMBL:EDR97683.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
type IV pilus assembly protein PilB
L1_007_000M1_scaffold_315_38
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53039..54148
DNA (1110bp) protein (370aa)
Twitching motility protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KGD6_9FIRM
Twitching motility protein {ECO:0000313|EMBL:EGN34205.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
pilT; pili retraction protein PilT
L1_007_000M1_scaffold_315_39
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54432..54875)
DNA (444bp) protein (148aa)
Toxin secretion/phage lysis holin n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLA8_9FIRM
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:EFB76766.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative holin
L1_007_000M1_scaffold_315_40
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54875..55498)
DNA (624bp) protein (208aa)
Peptidase, M23 family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRE6_9FIRM
Peptidase, M23 family {ECO:0000313|EMBL:EFB74672.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_315_41
unknown

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comp(55503..56954)
DNA (1452bp) protein (484aa)

This feature has no annotations

L1_007_000M1_scaffold_315_42
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56951..58576)
DNA (1626bp) protein (542aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AT52_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC56836.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
hypothetical protein
L1_007_000M1_scaffold_315_43
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58592..58939)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RKB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC49333.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L1_007_000M1_scaffold_315_44
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58943..60337)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74807.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative minor tail protein
L1_007_000M1_scaffold_315_45
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60458..61030)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74808.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Bacteriophage Gp15 protein.
L1_007_000M1_scaffold_315_46
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61027..61479)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74808.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_315_47
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61575..62051)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74809.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_315_48
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62048..62470)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74810.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_315_49
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62645..63046)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74811.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_315_50
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63039..63410)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74812.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_315_51
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63423..64277)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74813.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
head protein
L1_007_000M1_scaffold_315_52
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(64413..64571)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74814.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_315_53
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(64571..65968)
DNA (1398bp) protein (466aa)
Uncharacterized protein (Fragment) n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74815.1}; Flags: Fragment;; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative portal protein
L1_007_000M1_scaffold_315_54
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66055..67299)
DNA (1245bp) protein (415aa)
Phage terminase, large subunit, PBSX family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ39_9FIRM
Phage terminase, large subunit, PBSX family {ECO:0000313|EMBL:EFB75231.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
prophage LambdaCh01, PBSX family terminase large subunit
L1_007_000M1_scaffold_315_55
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67324..67509)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75230.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_315_56
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67653..68075)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75156.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_315_57
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(68381..69937)
DNA (1557bp) protein (519aa)
Phospholipase D domain protein {ECO:0000313|EMBL:EFB75158.1}; EC=3.1.-.- {ECO:0000313|EMBL:EFB75158.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Phospholipase D domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ48_9FIRM
L1_007_000M1_scaffold_315_58
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(70022..70339)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75159.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_315_59
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

70525..71394
DNA (870bp) protein (290aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Transketolase, thiamine diphosphate binding domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ51_9FIRM
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:EFB75161.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_315_60
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

71387..72343
DNA (957bp) protein (319aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Transketolase, pyridine binding domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ52_9FIRM
Transketolase, pyridine binding domain protein {ECO:0000313|EMBL:EFB75162.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Displaying items 31-60 of 128 in total

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