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L1_007_000M1_scaffold_315

Search features with annotation key words

Displaying items 91-120 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_315_91
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

108252..109241
DNA (990bp) protein (330aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB74756.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB74756.1};; Flags: Fragment;; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 2 family protein (Fragment) n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRD1_9FIRM
hypothetical protein
L1_007_000M1_scaffold_315_92
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

109333..110853
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74737.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
possible flippase
L1_007_000M1_scaffold_315_93
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

110877..111722
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74738.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
family 6 glycosyltransferase
L1_007_000M1_scaffold_315_94
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

111729..113462
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74739.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_315_95
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

113571..114089
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75127.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_315_96
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(114136..116406)
DNA (2271bp) protein (757aa)
Stage II sporulation protein E (Fragment) n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PR62_9FIRM
Stage II sporulation protein E {ECO:0000313|EMBL:EFB74909.1}; Flags: Fragment;; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Stage II sporulation protein E (SpoIIE).
L1_007_000M1_scaffold_315_97
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(116596..118188)
DNA (1593bp) protein (531aa)
Glycosyltransferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:EFB75283.1}; EC=2.4.1.- {ECO:0000313|EMBL:EFB75283.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
wecB; glycosyltransferase (EC:2.4.1.-)
Glycosyltransferase, WecB/TagA/CpsF family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPT7_9FIRM
L1_007_000M1_scaffold_315_98
unknown

Not on your lists

118447..119028
DNA (582bp) protein (194aa)

This feature has no annotations

L1_007_000M1_scaffold_315_99
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

119206..119916
DNA (711bp) protein (237aa)
Sortase family protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAB5_9CLOT
Sortase family protein {ECO:0000313|EMBL:EEG31555.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
LPXTG-site transpeptidase (sortase) family protein
L1_007_000M1_scaffold_315_100
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

119930..120799
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31554.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
L1_007_000M1_scaffold_315_101
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

120813..121508
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RSC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71518.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Capsular polysaccharide biosynthesis protein
L1_007_000M1_scaffold_315_102
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

121505..122245
DNA (741bp) protein (247aa)
Capsular exopolysaccharide family protein (Fragment) n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RSY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF40313.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
capsular exopolysaccharide family
L1_007_000M1_scaffold_315_103

Not on your lists

122242..122997
DNA (756bp) protein (252aa)
Capsular polysaccharide biosynthesis protein (EC:3.1.3.48)
Capsular polysaccharide biosynthesis protein (Fragment) n=1 Tax=human gut metagenome RepID=K1U9S4_9ZZZZ
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:EKC74990.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_000M1_scaffold_315_104
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(123105..123950)
DNA (846bp) protein (282aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB75053.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB75053.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQG3_9FIRM
Glycosyltransferases involved in cell wall biogenesis
L1_007_000M1_scaffold_315_105
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

124212..125702
DNA (1491bp) protein (497aa)
Carboxypeptidase Taq (M32) metallopeptidase {ECO:0000313|EMBL:EFB75054.1}; EC=3.4.17.19 {ECO:0000313|EMBL:EFB75054.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Zn-dependent carboxypeptidase (EC:3.4.17.19)
Carboxypeptidase Taq (M32) metallopeptidase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQG4_9FIRM
L1_007_000M1_scaffold_315_106
unknown

Not on your lists

comp(125812..126375)
DNA (564bp) protein (188aa)

This feature has no annotations

L1_007_000M1_scaffold_315_107
unknown

Not on your lists

comp(126612..127088)
DNA (477bp) protein (159aa)

This feature has no annotations

L1_007_000M1_scaffold_315_108
Enterococcus pallens, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(127128..127511)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Enterococcus pallens ATCC BAA-351 RepID=R2QN96_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH97997.1}; TaxID=1158607 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus pallens ATCC BAA-351.;"
transcriptional regulator, HxlR family
L1_007_000M1_scaffold_315_109
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

127711..129009
DNA (1299bp) protein (433aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQI3_9FIRM
L1_007_000M1_scaffold_315_110
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

129006..129926
DNA (921bp) protein (307aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|SAAS:SAAS00018238}; EC=6.1.1.- {ECO:0000256|SAAS:SAAS00018222};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glutamyl-and glutaminyl-tRNA synthetases (EC:6.1.1.- 6.1.1.17)
Glutamyl-queuosine tRNA(Asp) synthetase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQI4_9FIRM
L1_007_000M1_scaffold_315_111
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

130164..132764
DNA (2601bp) protein (867aa)
Copper-exporting ATPase {ECO:0000313|EMBL:EFB75043.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EFB75043.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Copper-exporting ATPase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQI5_9FIRM
L1_007_000M1_scaffold_315_112
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

132761..133045
DNA (285bp) protein (95aa)
Acylphosphatase {ECO:0000313|EMBL:EFB75044.1}; EC=3.6.1.7 {ECO:0000313|EMBL:EFB75044.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Acylphosphatases (EC:3.6.1.7)
Acylphosphatase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQI6_9FIRM
L1_007_000M1_scaffold_315_113
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

133217..134050
DNA (834bp) protein (278aa)
Ribosomal RNA small subunit methyltransferase I (Fragment) n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQH9_9FIRM
S-adenosylmethionine-dependent methyltransferase, YraL family {ECO:0000313|EMBL:EFB75037.1}; Flags: Fragment;; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
conserved hypothetical protein TIGR00096
L1_007_000M1_scaffold_315_114
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

134286..134771
DNA (486bp) protein (162aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Phosphodiesterase family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ43_9FIRM
phosphodiesterase, MJ0936 family
L1_007_000M1_scaffold_315_115
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

134768..135502
DNA (735bp) protein (245aa)
Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:EFB75185.1}; EC=6.3.4.15 {ECO:0000313|EMBL:EFB75185.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ42_9FIRM
L1_007_000M1_scaffold_315_116
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(135701..136312)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75432.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted membrane protein
L1_007_000M1_scaffold_315_117
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(136372..137028)
DNA (657bp) protein (219aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPH1_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EFB75433.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L1_007_000M1_scaffold_315_118
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(137163..138050)
DNA (888bp) protein (296aa)
Phospholipase, patatin family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRW3_9FIRM
Phospholipase, patatin family {ECO:0000313|EMBL:EFB74491.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
patatin
L1_007_000M1_scaffold_315_119
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

138177..138920
DNA (744bp) protein (248aa)
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
Putative 3-dehydroquinate dehydratase, type I (Fragment) n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRW1_9FIRM
Putative 3-dehydroquinate dehydratase, type I {ECO:0000313|EMBL:EFB74489.1}; Flags: Fragment;; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_315_120
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(139106..139273)
DNA (168bp) protein (56aa)
Dissimilatory sulfite reductase (Desulfoviridin), alpha and beta subunits n=2 Tax=Faecalibacterium prausnitzii RepID=D4K8W7_9FIRM
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits
Dissimilatory sulfite reductase (Desulfoviridin), alpha and beta subunits {ECO:0000313|EMBL:CBL01280.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Displaying items 91-120 of 128 in total

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