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L1_007_000M1_scaffold_315

Search features with annotation key words

Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_000M1_scaffold_315_1
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..975)
DNA (975bp) protein (325aa)
conjugal transfer protein TraG n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000289D4FD
Conjugal transfer protein TraG {ECO:0000313|EMBL:KJS13436.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
conjugal transfer protein TraG
L1_007_000M1_scaffold_315_2
unknown

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comp(981..1802)
DNA (822bp) protein (274aa)

This feature has no annotations

L1_007_000M1_scaffold_315_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1803..2366)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72943.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_000M1_scaffold_315_4

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comp(2341..3738)
DNA (1398bp) protein (466aa)
Relaxase mobilisation nuclease domain n=1 Tax=uncultured bacterium RepID=S6CP15_9BACT
Relaxase mobilisation nuclease domain {ECO:0000313|EMBL:CCG05864.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
L1_007_000M1_scaffold_315_5

Not on your lists

comp(3738..4046)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=uncultured bacterium PF5_9BACT">RepID=S6CPF5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCG05863.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
HutU; urocanate hydratase
L1_007_000M1_scaffold_315_6
unknown

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comp(4127..4597)
DNA (471bp) protein (157aa)

This feature has no annotations

L1_007_000M1_scaffold_315_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4613..5434)
DNA (822bp) protein (274aa)
Sortase, SrtB family n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRB4_9FIRM
sortase, SrtB family
Sortase, SrtB family {ECO:0000313|EMBL:CBK95633.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_007_000M1_scaffold_315_8

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comp(5450..6667)
DNA (1218bp) protein (406aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1UUA3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC75176.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Cna protein B-type domain.
L1_007_000M1_scaffold_315_9
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6612..10943)
DNA (4332bp) protein (1444aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38945.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L1_007_000M1_scaffold_315_10

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comp(11154..11498)
DNA (345bp) protein (115aa)
Plasmid stabilization system protein n=1 Tax=human gut metagenome RepID=K1RZI2_9ZZZZ
Plasmid stabilization system protein {ECO:0000313|EMBL:EKC53967.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_315_11

Not on your lists

comp(11495..11761)
DNA (267bp) protein (89aa)
Prevent-host-death family protein n=2 Tax=human gut metagenome RepID=K1S6R1_9ZZZZ
Prevent-host-death family protein {ECO:0000313|EMBL:EKC56362.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_000M1_scaffold_315_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11827..12534)
DNA (708bp) protein (236aa)
SCP-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRU2_9FIRM
SCP-like protein {ECO:0000313|EMBL:EFB74633.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_315_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12602..19843)
DNA (7242bp) protein (2414aa)
N-6 DNA Methylase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRU4_9FIRM
N-6 DNA Methylase {ECO:0000313|EMBL:EFB74635.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DNA methylase
L1_007_000M1_scaffold_315_14
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19972..21018)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JNG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS35760.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L1_007_000M1_scaffold_315_15
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21114..21686)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GPG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38950.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L1_007_000M1_scaffold_315_16
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21710..22111)
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF38951.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L1_007_000M1_scaffold_315_17
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22121..23053)
DNA (933bp) protein (311aa)
ParB-like partition protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAX2_9FIRM
Plasmid stablization protein ParB {ECO:0000313|EMBL:KJF38952.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ParB-like partition proteins
L1_007_000M1_scaffold_315_18
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23010..23816)
DNA (807bp) protein (269aa)
Chromosome (Plasmid) partitioning protein ParA n=1 Tax=Dehalobacter sp. UNSWDHB RepID=T0JK24_9FIRM
Chromosome partitioning protein ParA {ECO:0000313|EMBL:KJF38953.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
parA; Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj
L1_007_000M1_scaffold_315_19
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23825..24760)
DNA (936bp) protein (312aa)
Toprim domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38954.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
TOPRIM domain-containing protein
L1_007_000M1_scaffold_315_20

Not on your lists

comp(25366..26001)
DNA (636bp) protein (212aa)
RNA polymerase, sigma 28 subunit, SigK n=1 Tax=human gut metagenome RepID=K1VBW0_9ZZZZ
RNA polymerase, sigma 28 subunit, SigK {ECO:0000313|EMBL:EKC81456.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
RNA polymerase sigma 28 subunit SigK
L1_007_000M1_scaffold_315_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26141..27100)
DNA (960bp) protein (320aa)
K+-dependent Na+/Ca+ exchanger related-protein n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAX6_9FIRM
K+-dependent Na+/Ca+ exchanger related-protein
K+-dependent Na+/Ca+ exchanger family protein {ECO:0000313|EMBL:EDP22062.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_007_000M1_scaffold_315_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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27697..28131
DNA (435bp) protein (145aa)
Transcriptional regulator, AsnC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ00_9FIRM
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EFB75192.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Transcriptional regulators
L1_007_000M1_scaffold_315_23
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28139..28558
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75193.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_315_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28568..29557
DNA (990bp) protein (330aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB75194.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB75194.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQ02_9FIRM
Predicted glycosyltransferases
L1_007_000M1_scaffold_315_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29977..32052)
DNA (2076bp) protein (692aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Putative translation elongation factor G n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PR61_9FIRM
Putative translation elongation factor G {ECO:0000313|EMBL:EFB74908.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_000M1_scaffold_315_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32280..33500)
DNA (1221bp) protein (407aa)
Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PR95_9FIRM
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EFB74797.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_000M1_scaffold_315_27
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(33627..34382)
DNA (756bp) protein (252aa)
Prepilin-type cleavage/methylation protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CGB1_9CLOT
Prepilin-type cleavage/methylation protein {ECO:0000313|EMBL:ERI66381.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L1_007_000M1_scaffold_315_28
unknown

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comp(34379..34765)
DNA (387bp) protein (129aa)

This feature has no annotations

L1_007_000M1_scaffold_315_29
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(34783..35547)
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WLM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77958.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L1_007_000M1_scaffold_315_30
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(35570..46117)
DNA (10548bp) protein (3516aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SGQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC54561.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
Displaying items 1-30 of 128 in total

View Taxonomy