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L1_008_000G1_scaffold_11

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Displaying items 31-60 of 250 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_11_31
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29848..31566)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6I8Z6_9PSED
peptidase, C13 family
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_32
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31730..32185)
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6IJD8_9PSED
MaoC like domain-containing protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_33
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32370..32723
DNA (354bp) protein (118aa)
LrgA family protein n=3 Tax=Pseudomonas RepID=I2BXG1_PSEFL
LrgA family protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58944.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_34
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32720..33436
DNA (717bp) protein (239aa)
LrgB family membrane protein n=2 Tax=Pseudomonas RepID=I2BP27_PSEFL
LrgB family membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56010.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_35
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33458..34048
DNA (591bp) protein (197aa)
ATP-dependent protease La domain protein n=2 Tax=Pseudomonas RepID=I2BMV8_PSEFL
ATP-dependent protease La domain-containing protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_36
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34149..34364
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6I8Z3_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_37
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34358..35674)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KQC0_9PSED
PAP2 family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_38
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35831..36514)
DNA (684bp) protein (228aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
Putative 3-methyladenine DNA glycosylase n=2 Tax=Pseudomonas RepID=I4KGP7_PSEFL
DNA-3-methyladenine glycosylase
L1_008_000G1_scaffold_11_39
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36690..37955
DNA (1266bp) protein (422aa)
proA; glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Pseudomonas sp. CF150 RepID=S6J5P0_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_40
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37955..38599
DNA (645bp) protein (215aa)
nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=4 Tax=Pseudomonas RepID=I2BY60_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_41
Pseudomonas sp. RIT357, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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38666..39160
DNA (495bp) protein (165aa)
Ribosomal silencing factor RsfS n=6 Tax=Pseudomonas RepID=E2XYP1_PSEFL
Iojap protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1470593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. RIT357.;"
L1_008_000G1_scaffold_11_42
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39170..39637
DNA (468bp) protein (156aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1390371 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens EGD-AQ6.;"
Ribosomal RNA large subunit methyltransferase H n=9 Tax=Pseudomonas RepID=RLMH_PSEFS
rlmH; rRNA large subunit m3Psi methyltransferase RlmH
L1_008_000G1_scaffold_11_43
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39653..41551
DNA (1899bp) protein (633aa)
Penicillin-binding protein 2 n=2 Tax=Pseudomonas RepID=I2BWI4_PSEFL
mrdA_2; penicillin-binding protein 2
MrdA_2 protein {ECO:0000313|EMBL:AFJ58617.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_44
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41541..42686
DNA (1146bp) protein (382aa)
Rod shape-determining protein RodA n=3 Tax=Pseudomonas RepID=I2BSA9_PSEFL
mrdB; rod shape-determining protein RodA
Rod shape-determining protein RodA {ECO:0000313|EMBL:EIK59069.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_11_45
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42683..43714
DNA (1032bp) protein (344aa)
mltB; lytic murein transglycosylase B (EC:2.4.-.-)
Lytic murein transglycosylase B n=1 Tax=Pseudomonas sp. CF150 RepID=S6J2W1_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_46
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43714..44718
DNA (1005bp) protein (335aa)
Lipoprotein, RlpA family n=2 Tax=Pseudomonas RepID=I2BW18_PSEFL
lipoprotein, RlpA family
Uncharacterized protein {ECO:0000313|EMBL:AFJ58451.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_47
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44899..46056
DNA (1158bp) protein (386aa)
dacA; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
DacA protein {ECO:0000313|EMBL:AFJ56563.1}; EC=3.4.16.4 {ECO:0000313|EMBL:AFJ56563.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
D-alanyl-D-alanine carboxypeptidase DacA n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BQN0_PSEFL
L1_008_000G1_scaffold_11_48
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46142..46417
DNA (276bp) protein (92aa)
UPF0250 protein PflSS101_4765 n=2 Tax=Pseudomonas RepID=I4K594_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_49
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46417..47064
DNA (648bp) protein (216aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Octanoyltransferase n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BV14_PSEFL
lipB; lipoate-protein ligase B
L1_008_000G1_scaffold_11_50
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47066..48091
DNA (1026bp) protein (342aa)
lipA; lipoyl synthase (EC:2.8.1.8)
Lipoyl synthase n=2 Tax=Pseudomonas RepID=I2BNS8_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_51
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48244..49164
DNA (921bp) protein (307aa)
LD-carboxypeptidase family protein n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4KAS4_PSEFL
LD-carboxypeptidase family protein {ECO:0000313|EMBL:EIK61814.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
LD-carboxypeptidase family protein
L1_008_000G1_scaffold_11_52
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49280..50605)
DNA (1326bp) protein (442aa)
Lytic murein transglycosylase family protein n=2 Tax=Pseudomonas RepID=I4KCR3_PSEFL
lytic murein transglycosylase family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_53
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50667..50831)
DNA (165bp) protein (55aa)
Uncharacterized protein n=12 Tax=Pseudomonas RepID=C3K2L5_PSEFS
lipoyl synthase
Lipoyl synthase {ECO:0000313|EMBL:AIG03140.1}; Strain 2-79 PFLU3_contig000012, whole genome shotgun sequence {ECO:0000313|EMBL:KIR22700.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
L1_008_000G1_scaffold_11_54
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51066..52049)
DNA (984bp) protein (328aa)
holA; DNA polymerase III subunit delta (EC:2.7.7.7)
DNA polymerase III, delta subunit n=3 Tax=Pseudomonas RepID=I2BRH1_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_55
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52143..52748)
DNA (606bp) protein (202aa)
Lipoprotein, RplB family n=2 Tax=Pseudomonas RepID=I2BND2_PSEFL
lipoprotein, RplB family
LPS-assembly lipoprotein LptE {ECO:0000256|HAMAP-Rule:MF_01186, ECO:0000256|SAAS:SAAS00074334}; Flags: Precursor;; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_56
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(52837..55443)
DNA (2607bp) protein (869aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=2 Tax=Pseudomonas RepID=I4K4B1_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_57
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55705..56010
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6KQ77_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_58
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56108..56869
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BL53_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ54986.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_59
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56982..58505)
DNA (1524bp) protein (508aa)
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-)
Apolipoprotein N-acyltransferase n=3 Tax=Pseudomonas RepID=I2BUT8_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_60
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58514..59353)
DNA (840bp) protein (280aa)
Magnesium and cobalt efflux protein CorC n=3 Tax=Pseudomonas RepID=I2BXU8_PSEFL
corC; magnesium and cobalt efflux protein CorC
CorC protein {ECO:0000313|EMBL:AFJ59081.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Displaying items 31-60 of 250 in total

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