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L1_008_000G1_scaffold_11

Search features with annotation key words

Displaying items 61-90 of 250 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_11_61
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(59396..59854)
DNA (459bp) protein (153aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Endoribonuclease YbeY n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BRG6_PSEFL
ybeY; translation metalloprotein YbeY
L1_008_000G1_scaffold_11_62
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59847..61019)
DNA (1173bp) protein (391aa)
Phosphate starvation-inducible protein PhoH, predicted ATPase n=1 Tax=Pseudomonas fluorescens BBc6R8 RepID=V7E2Y7_PSEFL
PhoH family protein
Phosphate starvation-inducible protein PhoH, predicted ATPase {ECO:0000313|EMBL:ESW55298.1}; TaxID=463794 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens BBc6R8.;"
L1_008_000G1_scaffold_11_63
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61082..62410)
DNA (1329bp) protein (443aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=3 Tax=Pseudomonas RepID=I2BQ63_PSEFL
miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB
L1_008_000G1_scaffold_11_64
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62541..62867
DNA (327bp) protein (109aa)
Uncharacterized protein n=6 Tax=Pseudomonas RepID=I2BRW1_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESW55300.1}; TaxID=463794 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens BBc6R8.;"
L1_008_000G1_scaffold_11_65
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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63091..65145
DNA (2055bp) protein (685aa)
tmd; trimethylamine dehydrogenase (EC:1.5.8.2)
Trimethylamine dehydrogenase n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BRQ6_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_66
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65184..65942
DNA (759bp) protein (253aa)
Lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT n=3 Tax=Pseudomonas RepID=I2BT23_PSEFL
argT; lysine/arginine/ornithine ABC transporter, periplasmic lysine/arginine/ornithine-binding protein ArgT
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_67
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65973..66689
DNA (717bp) protein (239aa)
Lysine/arginine/ornithine ABC transporter, permease protein HisQ n=3 Tax=Pseudomonas RepID=I2BUL3_PSEFL
hisQ3; lysine/arginine/ornithine ABC transporter, permease protein HisQ
HisQ3 protein {ECO:0000313|EMBL:AFJ57946.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_68
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66686..67396
DNA (711bp) protein (237aa)
Lysine/arginine/ornithine ABC transporter, permease protein HisM n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BY26_PSEFL
hisM3; lysine/arginine/ornithine ABC transporter, permease protein HisM
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_69
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67405..68517
DNA (1113bp) protein (371aa)
Putative amino acid ABC transporter-like protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6J565_9PSED
succinylglutamate desuccinylase/aspartoacylase family
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_70
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68518..69072)
DNA (555bp) protein (185aa)
Sel1 domain protein n=3 Tax=Pseudomonas RepID=I2BLH0_PSEFL
Sel1 domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ55103.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_71
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69299..70582)
DNA (1284bp) protein (428aa)
hemL; glutamate-1-semialdehyde-2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=2 Tax=Pseudomonas RepID=S6IPK6_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_72
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70594..71223)
DNA (630bp) protein (210aa)
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Thiamine-phosphate synthase n=3 Tax=Pseudomonas RepID=I2BX01_PSEFL
L1_008_000G1_scaffold_11_73
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71254..72051)
DNA (798bp) protein (266aa)
thiD; phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=2 Tax=Pseudomonas RepID=S6H2U7_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_74
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72327..74726
DNA (2400bp) protein (800aa)
Sensor histidine kinase/response regulator n=3 Tax=Pseudomonas RepID=I2BLX3_PSEFL
ladS; sensor histidine kinase/response regulator
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_75
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74795..76447
DNA (1653bp) protein (551aa)
AidB protein {ECO:0000313|EMBL:AFJ57224.1}; EC=1.3.8.4 {ECO:0000313|EMBL:AFJ57224.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
aidB; isovaleryl-CoA dehydrogenase/acyl-CoA dehydrogenase (EC:1.3.99.3 1.3.99.10)
Isovaleryl-CoA dehydrogenase/acyl-CoA dehydrogenase, putative n=2 Tax=Pseudomonas RepID=I2BSJ1_PSEFL
L1_008_000G1_scaffold_11_76
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76640..78103
DNA (1464bp) protein (488aa)
amn; AMP nucleosidase (EC:3.2.2.4)
AMP nucleosidase {ECO:0000256|HAMAP-Rule:MF_01932}; EC=3.2.2.4 {ECO:0000256|HAMAP-Rule:MF_01932};; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
AMP nucleosidase n=4 Tax=Pseudomonas RepID=I2BUY2_PSEFL
L1_008_000G1_scaffold_11_77
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78175..78807
DNA (633bp) protein (211aa)
rluE; ribosomal large subunit pseudouridine synthase E (EC:5.4.99.-)
Pseudouridine synthase n=2 Tax=Pseudomonas RepID=S6H4E1_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_78
Pseudomonas sp. FH1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78802..79020)
DNA (219bp) protein (73aa)
Uncharacterized protein n=6 Tax=Pseudomonas RepID=I2BSY3_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETK25169.1}; TaxID=1284392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FH1.;"
L1_008_000G1_scaffold_11_79
Pseudomonas sp. Ag1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79198..79677)
DNA (480bp) protein (160aa)
Transcriptional regulator, AsnC family n=11 Tax=Pseudomonas RepID=I2BT66_PSEFL
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:EJF70020.1}; TaxID=1197727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Ag1.;"
L1_008_000G1_scaffold_11_80
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80105..81067
DNA (963bp) protein (321aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BXA7_PSEFL
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_81
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81064..81957)
DNA (894bp) protein (298aa)
Cation diffusion facilitator family transporter FieF n=2 Tax=Pseudomonas RepID=I2BYW0_PSEFL
fieF; cation diffusion facilitator family transporter FieF
FieF protein {ECO:0000313|EMBL:AFJ59443.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_82
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81967..82386)
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=S6H4D4_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_83
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82640..85147
DNA (2508bp) protein (836aa)
hrpB; ATP-dependent helicase HrpB (EC:3.6.1.-)
HrpB protein {ECO:0000313|EMBL:AFJ56483.1}; EC=3.6.1.- {ECO:0000313|EMBL:AFJ56483.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
ATP-dependent RNA helicase n=1 Tax=Pseudomonas sp. CFT9 RepID=S6H899_9PSED
L1_008_000G1_scaffold_11_84
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85270..86358)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6IE15_9PSED
endonuclease/exonuclease/phosphatase family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_85
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86400..87068)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CFT9 RepID=S6IPH7_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_86
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87242..87964
DNA (723bp) protein (241aa)
Putative periplasmic ligand-binding sensor protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6JCB7_9PSED
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_11_87
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88083..88559
DNA (477bp) protein (159aa)
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I2BV26_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58109.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_88
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88585..89196
DNA (612bp) protein (204aa)
Exonuclease family protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BU97_PSEFL
exonuclease family protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ57830.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_89
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89524..89835)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BQY1_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ56664.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_11_90
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90310..90876
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Pseudomonas tolaasii RepID=UPI00036A5A07
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Displaying items 61-90 of 250 in total

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