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L1_008_000G1_scaffold_109

Search features with annotation key words

Displaying items 31-60 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_109_31
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36864..37382)
DNA (519bp) protein (173aa)
Arginine repressor n=2 Tax=Bifidobacterium dentium RepID=E0Q619_9BIFI
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
arginine repressor
L1_008_000G1_scaffold_109_32
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37382..38350)
DNA (969bp) protein (323aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=2 Tax=Bifidobacterium dentium RepID=E0Q618_9BIFI
L1_008_000G1_scaffold_109_33
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38369..39664)
DNA (1296bp) protein (432aa)
argD; acetylornithine aminotransferase (EC:2.6.1.81)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Acetylornithine aminotransferase n=4 Tax=Bifidobacterium dentium RepID=D2QAS5_BIFDB
L1_008_000G1_scaffold_109_34
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39654..40610)
DNA (957bp) protein (319aa)
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Acetylglutamate kinase n=4 Tax=Bifidobacterium dentium RepID=D2QAS6_BIFDB
L1_008_000G1_scaffold_109_35
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40620..41792)
DNA (1173bp) protein (391aa)
argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase (EC:2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=2 Tax=Bifidobacterium dentium RepID=E0Q615_9BIFI
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_109_36
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41789..42883)
DNA (1095bp) protein (365aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q614_9BIFI
L1_008_000G1_scaffold_109_37
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43017..43772)
DNA (756bp) protein (252aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S9D4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO96198.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_000G1_scaffold_109_38
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43805..46414)
DNA (2610bp) protein (870aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q612_9BIFI
L1_008_000G1_scaffold_109_39
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(46422..47474)
DNA (1053bp) protein (351aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Bifidobacterium dentium RepID=B1S9D2_9BIFI
L1_008_000G1_scaffold_109_40
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47555..48427)
DNA (873bp) protein (291aa)
methylase (EC:2.1.1.66)
rRNA methylase n=4 Tax=Bifidobacterium dentium RepID=D2QAT2_BIFDB
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EFM42084.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_109_41
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48619..50340
DNA (1722bp) protein (574aa)
Permease protein of ABC transporter system n=2 Tax=Bifidobacterium dentium RepID=D2QAT3_BIFDB
ABC transporter permease
Permease protein of ABC transporter system {ECO:0000313|EMBL:ADB09919.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_109_42
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50352..51035
DNA (684bp) protein (228aa)
ABC transporter ATP-binding protein (EC:3.6.3.36)
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:ADB09920.1}; EC=3.6.3.36 {ECO:0000313|EMBL:ADB09920.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
ATP-binding protein of ABC transporter system n=4 Tax=Bifidobacterium dentium RepID=D2QAT4_BIFDB
L1_008_000G1_scaffold_109_43
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51042..52409)
DNA (1368bp) protein (456aa)
peptidase family M20A protein (EC:3.4.13.20)
Peptidase dimerization domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q607_9BIFI
Peptidase dimerization domain protein {ECO:0000313|EMBL:EFM42081.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_109_44
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52533..53132
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S9C7_9BIFI
PF11241 family protein {ECO:0000313|EMBL:ETO96188.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
membrane protein
L1_008_000G1_scaffold_109_45
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

53238..54719
DNA (1482bp) protein (494aa)
pdhD; pdhD Dihydrolipoamide dehydrogenase (EC:1.8.1.4)
PdhD Dihydrolipoamide dehydrogenase n=2 Tax=Bifidobacterium dentium RepID=D2QAT7_BIFDB
Putative dihydrolipoyl dehydrogenase {ECO:0000313|EMBL:ETO96377.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_109_46
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

54828..55610
DNA (783bp) protein (261aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q604_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42078.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
membrane protein
L1_008_000G1_scaffold_109_47
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

55897..57333
DNA (1437bp) protein (479aa)
glnA1; glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Glutamine synthetase n=4 Tax=Bifidobacterium dentium RepID=D2QAT9_BIFDB
L1_008_000G1_scaffold_109_48
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57500..57736)
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q602_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42076.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_109_49
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57776..58606)
DNA (831bp) protein (277aa)
ATP-dependent carboxylate-amine ligase n=2 Tax=Bifidobacterium dentium RepID=D2QAU0_BIFDB
ATP-dependent carboxylate-amine ligase
ATP-dependent carboxylate-amine ligase {ECO:0000313|EMBL:ADB09926.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_109_50
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59708..60520)
DNA (813bp) protein (271aa)
Sugar transporter superfamily protein n=2 Tax=Bifidobacterium dentium RepID=D2QAU1_BIFDB
Transporter, major facilitator family protein {ECO:0000313|EMBL:ETO96272.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
sugar ABC transporter
L1_008_000G1_scaffold_109_51
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(60971..61519)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Z7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42071.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
phage integrase
L1_008_000G1_scaffold_109_52
unknown

Not on your lists

comp(61701..62183)
DNA (483bp) protein (161aa)

This feature has no annotations

L1_008_000G1_scaffold_109_53
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

62559..62849
DNA (291bp) protein (97aa)
Toxin-antitoxin system, antitoxin component, HicB family n=2 Tax=Bifidobacterium dentium RepID=B1S9B5_9BIFI
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27248.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_109_54
unknown

Not on your lists

comp(62894..63556)
DNA (663bp) protein (221aa)

This feature has no annotations

L1_008_000G1_scaffold_109_55
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(63875..64909)
DNA (1035bp) protein (345aa)
lipase (EC:3.1.1.79)
Lipase {ECO:0000313|EMBL:ADB09931.1}; EC=3.1.1.79 {ECO:0000313|EMBL:ADB09931.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Lipase n=4 Tax=Bifidobacterium dentium RepID=D2QAU5_BIFDB
L1_008_000G1_scaffold_109_56
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(64911..66359)
DNA (1449bp) protein (483aa)
MFS transporter, SP family n=2 Tax=Bifidobacterium dentium RepID=E0Q5Z3_9BIFI
MFS transporter, SP family {ECO:0000313|EMBL:EFM42067.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
glucose/fructose transport protein
L1_008_000G1_scaffold_109_57
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

66560..67444
DNA (885bp) protein (295aa)
Transcriptional regulator, AraC family n=2 Tax=Bifidobacterium dentium RepID=E0Q5Z2_9BIFI
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFM42066.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
AraC family transcriptional regulator
L1_008_000G1_scaffold_109_58
unknown

Not on your lists

67545..67895
DNA (351bp) protein (117aa)

This feature has no annotations

L1_008_000G1_scaffold_109_59
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(67856..68290)
DNA (435bp) protein (145aa)
Uncharacterized protein n=3 Tax=Bifidobacterium dentium RepID=B1S9A8_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27253.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
res; type III restriction protein res subunit
L1_008_000G1_scaffold_109_60
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(68564..69049)
DNA (486bp) protein (162aa)
Sortase n=4 Tax=Bifidobacterium dentium RepID=D2QAU9_BIFDB
sortase
Sortase {ECO:0000313|EMBL:ADB09935.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Displaying items 31-60 of 110 in total

View Taxonomy