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L1_008_000G1_scaffold_109

Search features with annotation key words

Displaying items 61-90 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_109_61
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(69714..69875)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Y7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42061.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_109_62
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(70063..70560)
DNA (498bp) protein (166aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S9A0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO96265.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_000G1_scaffold_109_63
unknown

Not on your lists

comp(70634..70786)
DNA (153bp) protein (51aa)

This feature has no annotations

L1_008_000G1_scaffold_109_64
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(71029..71568)
DNA (540bp) protein (180aa)
Lysine decarboxylase n=2 Tax=Bifidobacterium dentium RepID=D2QAV2_BIFDB
TIGR00730 family protein {ECO:0000313|EMBL:ETO96329.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
lysine decarboxylase
L1_008_000G1_scaffold_109_65
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(71647..72471)
DNA (825bp) protein (275aa)
Cobalt transport protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Y3_9BIFI
Cobalt transport protein {ECO:0000313|EMBL:EFM42057.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ABC transporter permease
L1_008_000G1_scaffold_109_66
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(72468..73961)
DNA (1494bp) protein (498aa)
Cobalt ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFM42056.1}; EC=3.6.3.- {ECO:0000313|EMBL:EFM42056.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ABC transporter ATP-binding protein (EC:3.6.3.17)
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5Y2_9BIFI
L1_008_000G1_scaffold_109_67
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(74066..74677)
DNA (612bp) protein (204aa)
Permease protein of ABC transporter system n=4 Tax=Bifidobacterium dentium RepID=D2QAV5_BIFDB
ABC transporter permease
Permease protein of ABC transporter system {ECO:0000313|EMBL:ADB09941.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_000G1_scaffold_109_68
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(74846..75970)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5Y0_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27261.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
mrp; mrp ATP-binding Mrp-like protein
L1_008_000G1_scaffold_109_69
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76056..78749)
DNA (2694bp) protein (898aa)
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
DNA ligase n=2 Tax=Bifidobacterium dentium RepID=D2QAV7_BIFDB
L1_008_000G1_scaffold_109_70
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(78765..82163)
DNA (3399bp) protein (1133aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5X8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42052.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_000G1_scaffold_109_71
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

82277..84409
DNA (2133bp) protein (711aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5X7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42051.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_000G1_scaffold_109_72
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

84559..86220
DNA (1662bp) protein (554aa)
Arylsulfate sulfotransferase n=2 Tax=Bifidobacterium dentium RepID=D2QAW0_BIFDB
arylsulfate sulfotransferase
Arylsulfotransferase {ECO:0000313|EMBL:ETO96128.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_109_73
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

86267..87118
DNA (852bp) protein (284aa)
ABC transporter ATP-binding protein (EC:3.6.3.20)
ATP-binding protein of ABC transporter system n=2 Tax=Bifidobacterium dentium RepID=D2QAW1_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27266.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_109_74
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(87125..88291)
DNA (1167bp) protein (389aa)
aminotransferase (EC:4.4.1.14)
Aminotransferase, class I/II n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S918_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27267.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_109_75
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(88370..89137)
DNA (768bp) protein (256aa)
polyphosphate glucokinase/transcriptional regulator (EC:2.7.1.4)
ROK family protein {ECO:0000313|EMBL:EFM42047.1}; EC=2.7.1.63 {ECO:0000313|EMBL:EFM42047.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Polyphosphate glucokinase/Transcriptional regulator n=4 Tax=Bifidobacterium dentium RepID=D2QAW3_BIFDB
L1_008_000G1_scaffold_109_76
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

89537..90139
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5X2_9BIFI
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_000G1_scaffold_109_77
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

90139..92442
DNA (2304bp) protein (768aa)
ABC transporter ATP-binding protein (EC:3.6.3.17)
Cobalt ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5X1_9BIFI
Cobalt ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFM42045.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_109_78
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

92485..93843
DNA (1359bp) protein (453aa)
prolidase (X-Pro dipeptidase) (EC:3.5.2.7)
Amidohydrolase family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5X0_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27271.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_109_79
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

93950..94255
DNA (306bp) protein (102aa)
Hypothetical RNA binding protein n=4 Tax=Bifidobacterium dentium RepID=D2QAW7_BIFDB
hypothetical protein
RNA-binding protein, YhbY family {ECO:0000313|EMBL:ETO96140.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_000G1_scaffold_109_80
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(94396..95145)
DNA (750bp) protein (250aa)
tenA; transcriptional activator tenA (EC:2.5.1.3)
TENA/THI-4 family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5W8_9BIFI
TENA/THI-4 family protein {ECO:0000313|EMBL:EFM42042.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_000G1_scaffold_109_81
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(95333..99193)
DNA (3861bp) protein (1287aa)
SNF2 family N-terminal domain protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5W7_9BIFI
SNF2 family N-terminal domain protein {ECO:0000313|EMBL:EFM42041.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
helicase
L1_008_000G1_scaffold_109_82
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(99216..100778)
DNA (1563bp) protein (521aa)
aminopeptidase C (EC:3.4.22.40)
Aminopeptidase C {ECO:0000313|EMBL:ADB09956.1}; EC=3.4.22.40 {ECO:0000313|EMBL:ADB09956.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Peptidase C1-like family n=2 Tax=Bifidobacterium dentium RepID=E1N8D3_9BIFI
L1_008_000G1_scaffold_109_83
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(100815..101651)
DNA (837bp) protein (279aa)
MazG family protein n=2 Tax=Bifidobacterium dentium RepID=B1S909_9BIFI
magZ; MazG-like conserved hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27276.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_000G1_scaffold_109_84
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

101705..102703
DNA (999bp) protein (333aa)
Conserved hypothetical secreted protein n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2QAX2_BIFDB
PF07510 family protein {ECO:0000313|EMBL:ETO96216.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_000G1_scaffold_109_85
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(102755..103504)
DNA (750bp) protein (250aa)
Ion channel n=2 Tax=Bifidobacterium dentium RepID=E0Q5W2_9BIFI
Ion channel {ECO:0000313|EMBL:EFM42036.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Potassium channel protein
L1_008_000G1_scaffold_109_86
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(103594..104979)
DNA (1386bp) protein (462aa)
MATE efflux family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5W1_9BIFI
MATE efflux family protein {ECO:0000313|EMBL:EFM42035.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Na+ driven multidrug efflux pump
L1_008_000G1_scaffold_109_87
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(105161..106153)
DNA (993bp) protein (331aa)
serA2; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.290)
SerA2 D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ADB09961.1}; EC=1.1.1.290 {ECO:0000313|EMBL:ADB09961.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
SerA2 D-3-phosphoglycerate dehydrogenase n=2 Tax=Bifidobacterium dentium RepID=D2QAX5_BIFDB
L1_008_000G1_scaffold_109_88
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

106287..106670
DNA (384bp) protein (128aa)
Uncharacterized protein n=3 Tax=Bifidobacterium dentium RepID=E1N8E0_9BIFI
PF04343 family protein {ECO:0000313|EMBL:ETO96146.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_000G1_scaffold_109_89
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(106694..107173)
DNA (480bp) protein (160aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160974}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160970};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
D-tyrosyl-tRNA(Tyr) deacylase n=2 Tax=Bifidobacterium dentium RepID=E0Q5V8_9BIFI
D-tyrosyl-tRNA(Tyr) deacylase
L1_008_000G1_scaffold_109_90
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(107386..107979)
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1N8E2_9BIFI
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFM42031.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
TetR family transcriptional regulator
Displaying items 61-90 of 110 in total

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