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L1_008_000G1_scaffold_286

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Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_286_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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389..1393
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BW35_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ58468.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_286_2
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1390..3024
DNA (1635bp) protein (545aa)
Uncharacterized protein {ECO:0000313|EMBL:AFJ59180.1}; EC=6.5.1.1 {ECO:0000313|EMBL:AFJ59180.1};; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
ATP-dependent DNA ligase domain protein (EC:6.5.1.1)
ATP-dependent DNA ligase domain protein n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BY47_PSEFL
L1_008_000G1_scaffold_286_3
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3249..4028
DNA (780bp) protein (260aa)
Histidine ABC transporter, periplasmic histidine-binding protein HisJ n=2 Tax=Pseudomonas RepID=I2BLS0_PSEFL
hisJ; histidine ABC transporter, periplasmic histidine-binding protein HisJ
HisJ protein {ECO:0000313|EMBL:AFJ55203.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_286_4
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4086..4814
DNA (729bp) protein (243aa)
Histidine ABC transporter, permease protein HisQ n=3 Tax=Pseudomonas RepID=I2BTB1_PSEFL
hisQ; histidine ABC transporter permease HisQ
HisQ protein {ECO:0000313|EMBL:AFJ57494.1}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_286_5
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4811..5521
DNA (711bp) protein (237aa)
Histidine ABC transporter, permease protein HisM n=3 Tax=Pseudomonas RepID=I4KDN2_PSEFL
Histidine ABC transporter, permease protein HisM {ECO:0000313|EMBL:EIK62822.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
hisM; histidine ABC transporter permease HisM
L1_008_000G1_scaffold_286_6
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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5531..6649
DNA (1119bp) protein (373aa)
Putative amino acid ABC transporter-like protein n=2 Tax=Pseudomonas RepID=S6IQ38_9PSED
succinylglutamate desuccinylase/aspartoacylase family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_286_7
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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6663..7427
DNA (765bp) protein (255aa)
Histidine ABC transporter, ATP-binding protein HisP n=3 Tax=Pseudomonas RepID=I2BX04_PSEFL
hisP; histidine ABC transporter ATP-binding protein HisP
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_286_8
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

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7644..10124
DNA (2481bp) protein (827aa)
Putative ATP-dependent helicase n=1 Tax=Pseudomonas sp. CF150 RepID=S6J990_9PSED
DEAD/DEAH box helicase
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_286_9
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10124..10774
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF150 RepID=S6JGZ0_9PSED
Ser/Thr phosphatase family protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_286_10
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10796..10993)
DNA (198bp) protein (66aa)
Uncharacterized protein n=4 Tax=Pseudomonas RepID=I2BT07_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIK68864.1}; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
L1_008_000G1_scaffold_286_11
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11102..11668)
DNA (567bp) protein (189aa)
Deoxycytidine triphosphate deaminase n=5 Tax=Pseudomonas RepID=DCD_PSEFS
putative deoxycytidine triphosphate deaminase
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_286_12
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12057..12266
DNA (210bp) protein (70aa)
Cold shock protein CapB n=110 Tax=Pseudomonas RepID=CAPB_PSESM
cold-shock protein
Cold shock protein {ECO:0000313|EMBL:BAQ72974.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
L1_008_000G1_scaffold_286_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12423..13430)
DNA (1008bp) protein (336aa)
RNA polymerase sigma factor RpoS n=3 Tax=Pseudomonas RepID=I4K477_PSEFL
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
RNA polymerase sigma factor
L1_008_000G1_scaffold_286_14
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13537..14373)
DNA (837bp) protein (279aa)
Putative lipoprotein NlpD n=1 Tax=Pseudomonas fluorescens SS101 RepID=I4KFR4_PSEFL
nlpD; lipoprotein NlpD
Putative lipoprotein NlpD {ECO:0000313|EMBL:EIK63554.1}; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
L1_008_000G1_scaffold_286_15
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14583..15260)
DNA (678bp) protein (226aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
Protein-L-isoaspartate O-methyltransferase n=4 Tax=Pseudomonas RepID=I2BNM1_PSEFL
protein-L-isoaspartate O-methyltransferase
L1_008_000G1_scaffold_286_16
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15260..16009)
DNA (750bp) protein (250aa)
surE; 5'/3'-nucleotidase SurE (EC:3.1.3.5 3.1.3.6)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
5'-nucleotidase SurE n=3 Tax=Pseudomonas RepID=I2BLR9_PSEFL
L1_008_000G1_scaffold_286_17
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15997..17055)
DNA (1059bp) protein (353aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.-)
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
tRNA pseudouridine synthase D n=1 Tax=Pseudomonas fluorescens A506 RepID=I2BRW5_PSEFL
L1_008_000G1_scaffold_286_18
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17052..17525)
DNA (474bp) protein (158aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1038924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens SS101.;"
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Pseudomonas RepID=I4KAE7_PSEFL
L1_008_000G1_scaffold_286_19
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17580..18425)
DNA (846bp) protein (282aa)
fghA; S-formylglutathione hydrolase (EC:3.1.2.12)
Putative esterase n=1 Tax=Pseudomonas sp. CF150 RepID=S6JGY1_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_286_20
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18434..19546)
DNA (1113bp) protein (371aa)
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase (EC:1.1.1.284 1.1.1.1)
S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase n=3 Tax=Pseudomonas RepID=I2BWB1_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_286_21
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19656..20552
DNA (897bp) protein (299aa)
Putative LysR family regulatory protein n=2 Tax=Pseudomonas RepID=S6IQ52_9PSED
LysR family transcriptional regulator
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_286_22
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20682..21389)
DNA (708bp) protein (236aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=3 Tax=Pseudomonas RepID=I2BZK8_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_286_23
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21386..21664)
DNA (279bp) protein (93aa)
Cell division protein FtsB n=5 Tax=Pseudomonas RepID=I2BKQ6_PSEFL
Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage
Cell division protein FtsB {ECO:0000256|HAMAP-Rule:MF_00599, ECO:0000256|SAAS:SAAS00014481}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
L1_008_000G1_scaffold_286_24
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21836..23125)
DNA (1290bp) protein (430aa)
eno; enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
Enolase n=7 Tax=Pseudomonas RepID=C3K6H6_PSEFS
L1_008_000G1_scaffold_286_25
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23283..24128)
DNA (846bp) protein (282aa)
kdsA; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
2-dehydro-3-deoxyphosphooctonate aldolase n=3 Tax=Pseudomonas RepID=I2BQS7_PSEFL
L1_008_000G1_scaffold_286_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24134..25765)
DNA (1632bp) protein (544aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1037911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens A506.;"
pyrG; CTP synthase (EC:6.3.4.2)
CTP synthase n=3 Tax=Pseudomonas RepID=I2BRN2_PSEFL
L1_008_000G1_scaffold_286_27
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26039..27358)
DNA (1320bp) protein (440aa)
tilS; tRNA(Ile)-lysidine synthetase (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Pseudomonas sp. CF150 RepID=S6JBV2_9PSED
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_286_28
Pseudomonas synxantha, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27533..28480)
DNA (948bp) protein (316aa)
Acetyl-coenzyme A carboxyl transferase alpha chain (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=96901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas synxantha BG33R.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=5 Tax=Pseudomonas RepID=I2BZ79_PSEFL
L1_008_000G1_scaffold_286_29
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28610..32131)
DNA (3522bp) protein (1174aa)
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=4 Tax=Pseudomonas RepID=I2BST7_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
L1_008_000G1_scaffold_286_30
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32208..32840)
DNA (633bp) protein (211aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=3 Tax=Pseudomonas RepID=I4KBY6_PSEFL
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
Displaying items 1-30 of 65 in total

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