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L1_008_000M1_scaffold_1643

Search features with annotation key words

Displaying items 31-54 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1643_31
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26009..26098
DNA (90bp) protein (30aa)
Ribosome biogenesis GTPase A n=1 Tax=Clostridium sp. CAG:269 RepID=R7IVP4_9CLOT
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L1_008_000M1_scaffold_1643_32
Clostridium sp. CAG:594, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26745..27434
DNA (690bp) protein (230aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:594 RepID=R6D8F9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA80461.1}; TaxID=1262826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:594.;"
L1_008_000M1_scaffold_1643_33

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27491..28189
DNA (699bp) protein (233aa)
Two-component system, OmpR family, response regulator n=2 Tax=root RepID=K1UWY7_9ZZZZ
Two-component system, OmpR family, response regulator {ECO:0000313|EMBL:EKC76111.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_000M1_scaffold_1643_34
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28186..29202
DNA (1017bp) protein (339aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=root RepID=R7IVP7_9CLOT
hypothetical protein
L1_008_000M1_scaffold_1643_35

Not on your lists

29321..30088
DNA (768bp) protein (256aa)
Uncharacterized protein n=2 Tax=root RepID=R7IXU2_9CLOT
Bacitracin export ATP-binding protein BceA {ECO:0000313|EMBL:EKC76109.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_1643_36
Clostridium sp. CAG:417, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30078..32108
DNA (2031bp) protein (677aa)
Efflux ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:417 RepID=R6SQT2_9CLOT
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDC62260.1}; TaxID=1262804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:417.;"
hypothetical protein
L1_008_000M1_scaffold_1643_37
Clostridium sp. CAG:594, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32154..32393)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:594 RepID=R6D8F3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA80456.1}; TaxID=1262826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:594.;"
Helix-turn-helix.
L1_008_000M1_scaffold_1643_38

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32622..33086
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RG17_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC44493.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_008_000M1_scaffold_1643_39
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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33149..34105
DNA (957bp) protein (319aa)
Ribosome biogenesis GTPase A n=1 Tax=Clostridium sp. CAG:343 RepID=R6N4U1_9CLOT
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
ribosome biogenesis GTP-binding protein YlqF
L1_008_000M1_scaffold_1643_40
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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34156..34551
DNA (396bp) protein (132aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
Mini-ribonuclease 3 n=1 Tax=Clostridium sp. CAG:343 RepID=R6NIG7_9CLOT
ribonuclease III
L1_008_000M1_scaffold_1643_41
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34815..36251
DNA (1437bp) protein (479aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
pyk; Pyk (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Clostridium sp. CAG:343 RepID=R6P819_9CLOT
L1_008_000M1_scaffold_1643_42
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36621..37733
DNA (1113bp) protein (371aa)
GTPase Der n=1 Tax=Clostridium sp. CAG:343 RepID=R6N203_9CLOT
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|SAAS:SAAS00038180}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
ribosome-associated GTPase EngA
L1_008_000M1_scaffold_1643_43
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37796..38437
DNA (642bp) protein (214aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Clostridium sp. CAG:343 RepID=R6NCL2_9CLOT
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
L1_008_000M1_scaffold_1643_44
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38484..39467
DNA (984bp) protein (328aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Clostridium sp. CAG:343 RepID=R6N4U6_9CLOT
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein
L1_008_000M1_scaffold_1643_45
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39579..40091
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6P823_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06012.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
L1_008_000M1_scaffold_1643_46
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40144..40581
DNA (438bp) protein (146aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Clostridium sp. CAG:343 RepID=R6NCL5_9CLOT
D-tyrosyl-tRNA(Tyr) deacylase
L1_008_000M1_scaffold_1643_47
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40589..41053
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N4V1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06015.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_1643_48
Tetranychus urticae, Tetranychus, Acari, Arthropoda, Metazoa

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comp(41069..41428)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Tetranychus urticae RepID=T1KV82_TETUR
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:tetur22g02790.1}; TaxID=32264 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Acariformes; Trombidiformes; Prostigmata; Eleutherengona; Raphignathae; Tetranychoidea; Tetranychidae; Tetranychus.;" source="Tetranychus urticae (Two-spotted spider mite).;"
hypothetical protein
L1_008_000M1_scaffold_1643_49
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41508..41789)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NIH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06016.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_1643_50
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41910..42827
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N209_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06018.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_1643_51
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43338..44219
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N4V5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06020.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_1643_52
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44243..45322
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6P832_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06022.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
L1_008_000M1_scaffold_1643_53
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45407..46645
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NCM2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06024.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_1643_54
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47005..47439)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NII4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06026.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
Displaying items 31-54 of 54 in total

View Taxonomy