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L1_008_000M1_scaffold_1889

Search features with annotation key words

Displaying items 31-60 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1889_31
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30435..32321
DNA (1887bp) protein (629aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N487_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CCY98825.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_000M1_scaffold_1889_32
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32565..33611
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NAA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98824.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1889_33
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34655..35428
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NNX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98662.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1889_34
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35540..37129)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98661.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L1_008_000M1_scaffold_1889_35
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37211..37300)
DNA (90bp) protein (30aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3U8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98660.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1889_36
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37344..39062)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N9W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98659.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1889_37
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39241..39720)
DNA (480bp) protein (160aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Phosphoesterase MJ0936 family n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4H1_9FIRM
phosphoesterase, MJ0936 family
L1_008_000M1_scaffold_1889_38
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(39717..40301)
DNA (585bp) protein (195aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NNX2_9FIRM
L1_008_000M1_scaffold_1889_39
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40298..41455)
DNA (1158bp) protein (386aa)
Predicted N6-adenine-specific DNA methylase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMT5_9FIRM
Predicted N6-adenine-specific DNA methylase {ECO:0000313|EMBL:CCY98656.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted N6-adenine-specific DNA methylase
L1_008_000M1_scaffold_1889_40
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41452..41985)
DNA (534bp) protein (178aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Phosphoesterase MJ0936 family n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3U4_9FIRM
phosphoesterase, MJ0936 family
L1_008_000M1_scaffold_1889_41
unknown

Not on your lists

42009..42335
DNA (327bp) protein (109aa)

This feature has no annotations

L1_008_000M1_scaffold_1889_42
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42189..42521)
DNA (333bp) protein (111aa)
Rhodanese-related sulfurtransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N9W2_9FIRM
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:CCY98654.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Rhodanese-related sulfurtransferase
L1_008_000M1_scaffold_1889_43
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42754..42969)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4G4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98653.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1889_44
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43173..44129)
DNA (957bp) protein (319aa)
Cation diffusion facilitator family transporter n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NNW7_9FIRM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:CCY98652.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
cation diffusion facilitator family transporter
L1_008_000M1_scaffold_1889_45
unknown

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44349..44669
DNA (321bp) protein (107aa)

This feature has no annotations

L1_008_000M1_scaffold_1889_46
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44908..45660)
DNA (753bp) protein (251aa)
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453, ECO:0000313|EMBL:CBL20158.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LJZ7_9FIRM
L1_008_000M1_scaffold_1889_47
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45632..46240)
DNA (609bp) protein (203aa)
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453, ECO:0000313|EMBL:CBL20158.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LJZ7_9FIRM
L1_008_000M1_scaffold_1889_48
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46562..47890
DNA (1329bp) protein (443aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LJZ8_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL20159.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000M1_scaffold_1889_49
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47986..48741)
DNA (756bp) protein (252aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7GPX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE29150.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L1_008_000M1_scaffold_1889_50
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48757..49404)
DNA (648bp) protein (216aa)
Predicted membrane protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NN23_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CCY98766.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted membrane protein
L1_008_000M1_scaffold_1889_51
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49571..50449
DNA (879bp) protein (293aa)
Transcriptional regulator n=3 Tax=Clostridiales RepID=D4LJZ9_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL20160.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000M1_scaffold_1889_52
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50478..51509)
DNA (1032bp) protein (344aa)
PRD domain protein, EF_0829/AHA_3910 family n=1 Tax=Blautia sp. KLE 1732 RepID=U2DDT3_9FIRM
PRD domain protein, EF_0829/AHA_3910 family {ECO:0000313|EMBL:ERI94503.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
transcriptional antiterminator BglG
L1_008_000M1_scaffold_1889_53
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51545..53797)
DNA (2253bp) protein (751aa)
PTS system IIA component Glc family (TC 4.A.1)/PTS system IIB component Glc family (TC 4.A.1)/PTS system IIC component Glc family (TC 4.A.1) n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GRA2_9FIRM
PTS system IIA component Glc family (TC 4.A.1)/PTS system IIB component Glc family (TC 4.A.1)/PTS system IIC component Glc family (TC 4.A.1) {ECO:0000313|EMBL:CDE29635.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1)
L1_008_000M1_scaffold_1889_54
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54235..55956
DNA (1722bp) protein (574aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N438_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CCY98770.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_000M1_scaffold_1889_55
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56105..56548)
DNA (444bp) protein (148aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5NN28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI94507.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
ribonuclease C Rne/Rng family
L1_008_000M1_scaffold_1889_56
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56535..57326)
DNA (792bp) protein (264aa)
ATPases involved in chromosome partitioning n=3 Tax=Clostridiales RepID=D4LK03_9FIRM
ATPases involved in chromosome partitioning
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CCY98772.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1889_57
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57629..58789)
DNA (1161bp) protein (387aa)
isoaspartyl dipeptidase IadA (EC:3.4.19.5)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Isoaspartyl dipeptidase n=3 Tax=Clostridiales RepID=D4LK04_9FIRM
L1_008_000M1_scaffold_1889_58
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58843..59334)
DNA (492bp) protein (164aa)
N-acetylglucosamine-6-phosphate deacetylase n=3 Tax=Clostridiales RepID=D4LK05_9FIRM
N-acetylglucosamine-6-phosphate deacetylase
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000313|EMBL:CCY98774.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1889_59
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(59340..60785)
DNA (1446bp) protein (482aa)
Transporter, NhaC family (TC 2.A.35) n=3 Tax=Clostridiales RepID=D4LK06_9FIRM
transporter, NhaC family (TC 2.A.35)
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:ERI94014.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L1_008_000M1_scaffold_1889_60
unknown

Not on your lists

comp(61112..61354)
DNA (243bp) protein (81aa)

This feature has no annotations

Displaying items 31-60 of 102 in total

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