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L1_008_000M1_scaffold_1889

Search features with annotation key words

Displaying items 61-90 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1889_61
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(61429..62715)
DNA (1287bp) protein (429aa)
Transposase domain (DUF772) n=2 Tax=Clostridiales RepID=D4LK07_9FIRM
Transposase domain (DUF772).
Uncharacterized protein {ECO:0000313|EMBL:ERI94016.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L1_008_000M1_scaffold_1889_62
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63152..63931)
DNA (780bp) protein (260aa)
Monosaccharide-transporting ATPase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NBC4_9FIRM
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:CCY99199.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
inner-membrane translocator
L1_008_000M1_scaffold_1889_63
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(64109..65647)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H204_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE33380.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
ABC transporter
L1_008_000M1_scaffold_1889_64
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(65733..66944)
DNA (1212bp) protein (404aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) n=3 Tax=Clostridiales RepID=D4LK09_9FIRM
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBL20170.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000M1_scaffold_1889_65
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67070..68134)
DNA (1065bp) protein (355aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H599_9FIRM
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:CDE33377.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
LacI family transcriptional regulator
L1_008_000M1_scaffold_1889_66
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(68155..69213)
DNA (1059bp) protein (353aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H200_9FIRM
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:CDE33375.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L1_008_000M1_scaffold_1889_67
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(69220..69753)
DNA (534bp) protein (178aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=2 Tax=Clostridiales RepID=D4LK10_9FIRM
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:CBL20171.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000M1_scaffold_1889_68
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(69731..71239)
DNA (1509bp) protein (503aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
HAMP domain protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2DMX1_9FIRM
HAMP domain.
L1_008_000M1_scaffold_1889_69
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(71217..72245)
DNA (1029bp) protein (343aa)
ABC-type sugar transport system periplasmic component n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H1Z6_9FIRM
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:CDE33370.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
ABC-type sugar transport system, periplasmic component
L1_008_000M1_scaffold_1889_70
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

72408..72878
DNA (471bp) protein (157aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NQG5_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCY99192.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
transcriptional regulator
L1_008_000M1_scaffold_1889_71
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

73027..74922
DNA (1896bp) protein (632aa)
Myosin-crossreactive antigen n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NP76_9FIRM
Myosin-crossreactive antigen {ECO:0000313|EMBL:CCY99191.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Myosin-crossreactive antigen
L1_008_000M1_scaffold_1889_72
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(74913..75407)
DNA (495bp) protein (165aa)
PP-loop family protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N597_9FIRM
PP-loop family protein {ECO:0000313|EMBL:CCY99190.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
conserved hypothetical protein TIGR00268
L1_008_000M1_scaffold_1889_73
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75977..76765)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NBB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY99189.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Metal-dependent hydrolases of the beta-lactamase superfamily III
L1_008_000M1_scaffold_1889_74
unknown

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comp(76749..76940)
DNA (192bp) protein (64aa)

This feature has no annotations

L1_008_000M1_scaffold_1889_75
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

77091..77618
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U824_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65157.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L1_008_000M1_scaffold_1889_76
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(77687..77830)
DNA (144bp) protein (48aa)
Inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000313|EMBL:CBL20179.1}; EC=3.6.1.1 {ECO:0000313|EMBL:CBL20179.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Inorganic pyrophosphatase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LK18_9FIRM
L1_008_000M1_scaffold_1889_77
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(77976..79580)
DNA (1605bp) protein (535aa)
Carbohydrate kinase, FGGY family protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2EXM2_9FIRM
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:ERI97801.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Sugar (pentulose and hexulose) kinases
L1_008_000M1_scaffold_1889_78
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(79599..81098)
DNA (1500bp) protein (500aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L-arabinose isomerase (EC:5.3.1.4)
L-arabinose isomerase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N5W9_9FIRM
L1_008_000M1_scaffold_1889_79
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(81279..82373)
DNA (1095bp) protein (365aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NP67_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCY99176.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
LacI family transcriptional regulator
L1_008_000M1_scaffold_1889_80
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82697..83197)
DNA (501bp) protein (167aa)
alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=2 Tax=Ruminococcus RepID=D4LK21_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:CDE29097.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L1_008_000M1_scaffold_1889_81
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(83247..83885)
DNA (639bp) protein (213aa)
alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase {ECO:0000313|EMBL:CBL20182.1}; EC=3.2.1.22 {ECO:0000313|EMBL:CBL20182.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Alpha-galactosidase n=2 Tax=Ruminococcus RepID=D4LK21_9FIRM
L1_008_000M1_scaffold_1889_82
unknown

Not on your lists

84075..84302
DNA (228bp) protein (76aa)

This feature has no annotations

L1_008_000M1_scaffold_1889_83
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(84202..85122)
DNA (921bp) protein (307aa)
Transcriptional regulator, AraC family n=1 Tax=Blautia sp. KLE 1732 RepID=U2ESK6_9FIRM
Putative raffinose operon transcriptional regulatory protein RafR {ECO:0000313|EMBL:CCY99173.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
AraC family transcriptional regulator
L1_008_000M1_scaffold_1889_84
unknown

Not on your lists

comp(85065..85196)
DNA (132bp) protein (44aa)

This feature has no annotations

L1_008_000M1_scaffold_1889_85
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(85273..87492)
DNA (2220bp) protein (740aa)
Alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase {ECO:0000313|EMBL:CBL20184.1}; EC=3.2.1.22 {ECO:0000313|EMBL:CBL20184.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Alpha-galactosidase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LK23_9FIRM
L1_008_000M1_scaffold_1889_86
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(87512..87634)
DNA (123bp) protein (41aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LK24_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL20185.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000M1_scaffold_1889_87
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(87673..88512)
DNA (840bp) protein (280aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LK25_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL20186.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000M1_scaffold_1889_88
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(88528..89430)
DNA (903bp) protein (301aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=2 Tax=Ruminococcus RepID=D4LK26_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDE30484.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L1_008_000M1_scaffold_1889_89
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(89530..90783)
DNA (1254bp) protein (418aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=2 Tax=Clostridiales RepID=R5MZH4_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CCY97160.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_1889_90
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

91341..91985
DNA (645bp) protein (215aa)
Predicted integral membrane protein n=3 Tax=Clostridiales RepID=D4LK28_9FIRM
Predicted integral membrane protein
Predicted integral membrane protein {ECO:0000313|EMBL:CDE29649.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Displaying items 61-90 of 102 in total

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