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L1_008_000M1_scaffold_2823

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2823_1
unknown

Not on your lists

2..79
DNA (78bp) protein (26aa)

This feature has no annotations

L1_008_000M1_scaffold_2823_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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114..437
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZID5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07041.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
HIRAN domain.
L1_008_000M1_scaffold_2823_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(986..2455)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74731.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_008_000M1_scaffold_2823_4

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comp(2482..2841)
DNA (360bp) protein (120aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1U2W5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC74269.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_008_000M1_scaffold_2823_5

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comp(2953..3300)
DNA (348bp) protein (116aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1U2W5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC74269.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Protein of unknown function, DUF624.
L1_008_000M1_scaffold_2823_6

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3734..4516
DNA (783bp) protein (261aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1VC71_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC81596.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_2823_7
unknown

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4516..4656
DNA (141bp) protein (47aa)

This feature has no annotations

L1_008_000M1_scaffold_2823_8
unknown

Not on your lists

4734..4886
DNA (153bp) protein (51aa)

This feature has no annotations

L1_008_000M1_scaffold_2823_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4925..6022
DNA (1098bp) protein (366aa)
Chorismate mutase {ECO:0000313|EMBL:EFB76951.1}; EC=5.4.99.5 {ECO:0000313|EMBL:EFB76951.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Prephenate dehydratase (EC:4.2.1.51)
Chorismate mutase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJK3_9FIRM
L1_008_000M1_scaffold_2823_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6051..7088
DNA (1038bp) protein (346aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJK2_9FIRM
L1_008_000M1_scaffold_2823_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7093..8187
DNA (1095bp) protein (365aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJK1_9FIRM
L1_008_000M1_scaffold_2823_12

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8220..9467
DNA (1248bp) protein (416aa)
Shikimate dehydrogenase n=1 Tax=human gut metagenome RepID=K1THN7_9ZZZZ
Shikimate dehydrogenase {ECO:0000313|EMBL:EKC65855.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Shikimate 5-dehydrogenase
L1_008_000M1_scaffold_2823_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9491..10786
DNA (1296bp) protein (432aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJJ8_9FIRM
L1_008_000M1_scaffold_2823_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10794..11654
DNA (861bp) protein (287aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:EFB76945.1}; EC=1.3.1.12 {ECO:0000313|EMBL:EFB76945.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJJ7_9FIRM
L1_008_000M1_scaffold_2823_15
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11696..12691
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76968.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted transcriptional regulator
L1_008_000M1_scaffold_2823_16
Solobacterium moorei, Solobacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12691..14745
DNA (2055bp) protein (685aa)
Uncharacterized protein n=1 Tax=Solobacterium moorei F0204 RepID=E7MQE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW23654.1}; TaxID=706433 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium.;" source="Solobacterium moorei F0204.;"
hypothetical protein
L1_008_000M1_scaffold_2823_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14966..16405
DNA (1440bp) protein (480aa)
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:EFB76969.1}; EC=2.7.8.- {ECO:0000313|EMBL:EFB76969.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJM1_9FIRM
undecaprenyl-phosphate glucose phosphotransferase
L1_008_000M1_scaffold_2823_18
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16427..17587
DNA (1161bp) protein (387aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFB76970.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB76970.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJM2_9FIRM
group 1 glycosyl transferase
L1_008_000M1_scaffold_2823_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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17584..18642
DNA (1059bp) protein (353aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFB76971.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB76971.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJM3_9FIRM
group 1 glycosyl transferase
L1_008_000M1_scaffold_2823_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18934..19830
DNA (897bp) protein (299aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB76974.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB76974.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJM6_9FIRM
glycosyl transferase 2
L1_008_000M1_scaffold_2823_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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19845..20978
DNA (1134bp) protein (378aa)
UDP-galactopyranose mutase {ECO:0000313|EMBL:EFB76976.1}; EC=5.4.99.9 {ECO:0000313|EMBL:EFB76976.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJM8_9FIRM
L1_008_000M1_scaffold_2823_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21075..21728
DNA (654bp) protein (218aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJM9_9FIRM
L1_008_000M1_scaffold_2823_23
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21746..22765
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76978.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfD
L1_008_000M1_scaffold_2823_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22743..23657
DNA (915bp) protein (305aa)
Na(+)-translocating NADH-quinone reductase subunit D domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN1_9FIRM
Na(+)-translocating NADH-quinone reductase subunit D domain protein {ECO:0000313|EMBL:EFB76979.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfE
L1_008_000M1_scaffold_2823_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23635..24279
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76980.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfA
L1_008_000M1_scaffold_2823_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24329..25621
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76981.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_008_000M1_scaffold_2823_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25640..26320
DNA (681bp) protein (227aa)
Superfamily II DNA and RNA helicases (EC:3.6.1.-)
Superfamily II DNA and RNA helicases {ECO:0000313|EMBL:CBL02021.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBL02021.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Superfamily II DNA and RNA helicases n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KB08_9FIRM
L1_008_000M1_scaffold_2823_28

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26317..27156
DNA (840bp) protein (280aa)
predicted 23S rRNA m(1)G methyltransferase (EC:2.1.1.51)
Ribosomal RNA large subunit methyltransferase A n=1 Tax=human gut metagenome RepID=K1S9M1_9ZZZZ
Ribosomal RNA large subunit methyltransferase A {ECO:0000313|EMBL:EKC54133.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_008_000M1_scaffold_2823_29
unknown

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comp(27331..27606)
DNA (276bp) protein (92aa)

This feature has no annotations

L1_008_000M1_scaffold_2823_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27697..28551
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76985.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Displaying items 1-30 of 85 in total

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