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L1_008_000M1_scaffold_1

Search features with annotation key words

Displaying items 211-240 of 309 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1_211
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(253458..255959)
DNA (2502bp) protein (834aa)
Carbohydrate binding domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GRM7_9BIFI
cellobiose-phosphorylase
Cellobiose-phosphorylase {ECO:0000313|EMBL:AII75878.1}; Glycosyl transferase {ECO:0000313|EMBL:KIM02060.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_212
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


256413..256625
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=3 Tax=Bifidobacterium RepID=RL31_BIFAA
50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_1_213
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

256807..257895
DNA (1089bp) protein (363aa)
Peptide chain release factor 1 n=3 Tax=Bifidobacterium RepID=RF1_BIFAA
peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_1_214
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

257905..258825
DNA (921bp) protein (307aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Release factor glutamine methyltransferase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GR56_9BIFI
putative methylase protein
L1_008_000M1_scaffold_1_215
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

259071..260267
DNA (1197bp) protein (399aa)
Solute binding protein of ABC transporter for branched-chain amino acids n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0J1_BIFAA
Branched-chain amino acid ABC transporter, solute-binding protein {ECO:0000313|EMBL:KFI96622.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
solute binding protein of ABC transporter for branched-chain amino acids
L1_008_000M1_scaffold_1_216
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

260442..261368
DNA (927bp) protein (309aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Bifidobacterium RepID=A7A4G4_BIFAD
permease of ABC transporter for branched-chain amino acids
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDN83797.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_008_000M1_scaffold_1_217
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

261373..262494
DNA (1122bp) protein (374aa)
Permease of ABC transporter for branched-chain amino acids n=2 Tax=Bifidobacterium RepID=A1A0J3_BIFAA
permease of ABC transporter for branched-chain amino acids
Permease of ABC transporter for branched-chain amino acids {ECO:0000313|EMBL:CCY19898.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_1_218
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

262491..263303
DNA (813bp) protein (271aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4G6_BIFAD
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIM02053.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
ATP binding protein of ABC transporter for branched-chain amino acids
L1_008_000M1_scaffold_1_219
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

263303..264007
DNA (705bp) protein (235aa)
ATP binding protein of ABC transporter for branched-chain amino acids n=3 Tax=Bifidobacterium RepID=A1A0J5_BIFAA
ATP binding protein of ABC transporter for branched-chain amino acids
ATP binding protein of ABC transporter for branched-chain amino acids {ECO:0000313|EMBL:AJE05458.1}; Amino acid ABC transporter ATPase {ECO:0000313|EMBL:KIM02052.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_220
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

264165..264827
DNA (663bp) protein (221aa)
Conserved protein in the Sua5/YciO/YrdC family n=2 Tax=Bifidobacterium adolescentis RepID=A1A0J6_BIFAA
Sua5/YciO/YrdC family protein
Sua5/YciO/YrdC family protein {ECO:0000313|EMBL:AII75887.1}; Translation factor Sua5 {ECO:0000313|EMBL:KIM02051.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_221
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

264824..266002
DNA (1179bp) protein (393aa)
Glycosyltransferase, group 4 family {ECO:0000313|EMBL:EDN83802.1}; EC=2.7.8.- {ECO:0000313|EMBL:EDN83802.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Glycosyltransferase, group 4 family n=2 Tax=root RepID=A7A4G9_BIFAD
putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase
L1_008_000M1_scaffold_1_222
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

266158..267684
DNA (1527bp) protein (509aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4H0_BIFAD
inosine-5'-monophosphate dehydrogenase
L1_008_000M1_scaffold_1_223
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(267848..268882)
DNA (1035bp) protein (345aa)
Probable LacI-type transcriptional regulator n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H191_9BIFI
LacI family transcriptional regulator {ECO:0000313|EMBL:KIM02048.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
LacI-type transcriptional regulator
L1_008_000M1_scaffold_1_224
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

269214..270971
DNA (1758bp) protein (586aa)
Alpha-glucosidase n=2 Tax=Bifidobacterium adolescentis RepID=Q93CA0_BIFAD
Putative alpha-1,4-glucosidase {ECO:0000313|EMBL:AJE05463.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
putative alpha-1,4-glucosidase
L1_008_000M1_scaffold_1_225
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

271210..271863
DNA (654bp) protein (218aa)
Oligoribonuclease n=3 Tax=root RepID=A1A0K1_BIFAA
oligoribonuclease
Oligoribonuclease {ECO:0000313|EMBL:AII75892.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_226
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

271891..272790
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GS14_9BIFI
putative sugar-phosphatase
Uncharacterized protein {ECO:0000313|EMBL:CCY18529.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_1_227
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

272835..274250
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GMB0_9BIFI
ATP-dependent endonuclease {ECO:0000313|EMBL:KIM02044.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
helicase
L1_008_000M1_scaffold_1_228
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(274265..274651)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4H7_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:KIM02043.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L1_008_000M1_scaffold_1_229
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


274841..276649
DNA (1809bp) protein (603aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Proline--tRNA ligase n=2 Tax=Bifidobacterium adolescentis RepID=SYP_BIFAA
prolyl-tRNA synthetase
L1_008_000M1_scaffold_1_230
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

277043..277621
DNA (579bp) protein (193aa)
Single-stranded DNA-binding protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4H9_BIFAD
Single-strand binding family protein {ECO:0000313|EMBL:EDN83812.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
L1_008_000M1_scaffold_1_231
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(277660..279750)
DNA (2091bp) protein (697aa)
Peptidase family M13 {ECO:0000313|EMBL:EDN83813.1}; EC=3.4.24.- {ECO:0000313|EMBL:EDN83813.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Peptidase family M13 n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4I0_BIFAD
belongs to peptidase family M13
L1_008_000M1_scaffold_1_232
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

279881..280654
DNA (774bp) protein (258aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Methionine aminopeptidase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4I1_BIFAD
methionine aminopeptidase
L1_008_000M1_scaffold_1_233
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

280795..282090
DNA (1296bp) protein (432aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Citrate synthase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4I2_BIFAD
citrate synthase 1
L1_008_000M1_scaffold_1_234
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

282232..283224
DNA (993bp) protein (331aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; Tetrahydropicolinate succinylase {ECO:0000256|HAMAP-Rule:MF_02122}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=3 Tax=Bifidobacterium RepID=A1A0K9_BIFAA
hypothetical protein
L1_008_000M1_scaffold_1_235
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

283232..283753
DNA (522bp) protein (174aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Ribosomal RNA large subunit methyltransferase H n=2 Tax=Bifidobacterium RepID=A7A4I5_BIFAD
rRNA large subunit methyltransferase
L1_008_000M1_scaffold_1_236
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

283802..283942
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H1A2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY18541.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L1_008_000M1_scaffold_1_237
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

284127..285257
DNA (1131bp) protein (377aa)
Peptide chain release factor 2 n=3 Tax=Bifidobacterium RepID=A1A0L1_BIFAA
peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_1_238
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

285281..286519
DNA (1239bp) protein (413aa)
FtsE-like ATP binding protein in cell division n=3 Tax=root RepID=A1A0L2_BIFAA
FtsE-like ATP binding protein in cell division
FtsE-like ATP binding protein in cell division {ECO:0000313|EMBL:AJE05478.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_239
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

286519..287442
DNA (924bp) protein (308aa)
Cell division protein FtsX n=2 Tax=Bifidobacterium adolescentis RepID=A1A0L3_BIFAA
FtsX-like protein in cell division
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_240
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

287530..288960
DNA (1431bp) protein (477aa)
CHAP domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4J0_BIFAD
CHAP domain protein {ECO:0000313|EMBL:EDN83823.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
hypothetical protein
Displaying items 211-240 of 309 in total

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