ggKbase home page

L1_008_000M1_scaffold_1

Search features with annotation key words

Displaying items 241-270 of 309 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1_241
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

289089..289568
DNA (480bp) protein (160aa)
SsrA-binding protein n=3 Tax=Bifidobacterium RepID=SSRP_BIFAA
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L1_008_000M1_scaffold_1_242
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

289695..290642
DNA (948bp) protein (316aa)
ABC transporter, substrate-binding protein, family 3 n=2 Tax=Bifidobacterium RepID=A7A4J3_BIFAD
ABC transporter solute-binding protein
ABC transporter solute-binding protein {ECO:0000313|EMBL:AII75909.1}; ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIM02033.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_243
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

290753..291688
DNA (936bp) protein (312aa)
Probable solute binding protein of ABC transporter system n=2 Tax=Bifidobacterium RepID=A1A0L7_BIFAA
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIM02032.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_244
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

291876..292805
DNA (930bp) protein (310aa)
Probable solute binding protein of ABC transporter system n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0L8_BIFAA
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIM02031.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
putative solute binding protein of ABC transporter system
L1_008_000M1_scaffold_1_245
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

292840..293823
DNA (984bp) protein (328aa)
Permease protein of ABC transporter system n=3 Tax=Bifidobacterium RepID=A1A0L9_BIFAA
permease protein of ABC transporter system
Permease protein of ABC transporter system {ECO:0000313|EMBL:AII75912.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_246
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

293835..294629
DNA (795bp) protein (265aa)
ATP binding protein of ABC transporter n=2 Tax=Bifidobacterium RepID=A1A0M0_BIFAA
ABC transporter ATP-binding protein
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIM02029.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_247
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

294859..296751
DNA (1893bp) protein (631aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0M1_BIFAA
glucosamine--fructose-6-phosphate aminotransferase
L1_008_000M1_scaffold_1_248
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

296771..297496
DNA (726bp) protein (242aa)
Pseudouridine synthase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GMX1_9BIFI
pseudouridine synthase
Pseudouridine synthase {ECO:0000313|EMBL:AII75915.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_249
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

297605..298897
DNA (1293bp) protein (431aa)
Serine/threonine transporter SstT n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=SSTT_BIFAA
transport protein
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_250
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

299093..300520
DNA (1428bp) protein (476aa)
Probable solute binding protein of ABC transporter system for sugars n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0M4_BIFAA
sugar ABC transporter solute-binding protein
Sugar ABC transporter solute-binding protein {ECO:0000313|EMBL:AII75917.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_251
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(300634..301404)
DNA (771bp) protein (257aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Type III pantothenate kinase n=2 Tax=Bifidobacterium RepID=A7A4L3_BIFAD
pantothenate kinase
L1_008_000M1_scaffold_1_252
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(301496..302776)
DNA (1281bp) protein (427aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4L4_BIFAD
Phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:KIM02024.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
phosphopantothenoylcysteine decarboxylase
L1_008_000M1_scaffold_1_253
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

302978..304633
DNA (1656bp) protein (552aa)
Solute binding protein of ABC transporter systemy for peptides n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0M7_BIFAA
Peptides ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFI96659.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
peptides ABC transporter substrate-binding protein
L1_008_000M1_scaffold_1_254
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

304649..305629
DNA (981bp) protein (327aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4L6_BIFAD
peptide ABC transporter permease
Peptide ABC transporter permease {ECO:0000313|EMBL:AII75921.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_255
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

305692..306576
DNA (885bp) protein (295aa)
Probable ABC transporter permease protein for peptides n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H0U9_9BIFI
Probable ABC transporter permease protein for peptides {ECO:0000313|EMBL:CCY18562.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
peptide ABC transporter permease
L1_008_000M1_scaffold_1_256
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

306573..307403
DNA (831bp) protein (277aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4L8_BIFAD
peptide ABC transporter ATP-binding protein
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:AII75923.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_257
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

307396..308172
DNA (777bp) protein (259aa)
Probable ATP binding protein of ABC transporter for peptides n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GMD4_9BIFI
Probable ATP binding protein of ABC transporter for peptides {ECO:0000313|EMBL:CCY18565.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
oppF; peptide ABC transporter ATP-binding protein
L1_008_000M1_scaffold_1_258
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

308370..309125
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0N2_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF39265.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_1_259
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

309233..310291
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H0V3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY18567.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L1_008_000M1_scaffold_1_260
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

310282..310953
DNA (672bp) protein (224aa)
ABC transporter n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GMY3_9BIFI
ABC transporter {ECO:0000313|EMBL:CCY18568.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
ABC transporter
L1_008_000M1_scaffold_1_261
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

310950..312098
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GS48_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY18569.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
hypothetical protein
L1_008_000M1_scaffold_1_262
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

312215..312580
DNA (366bp) protein (122aa)
Transcriptional regulator GntR family n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GMD6_9BIFI
Transcriptional regulator GntR family {ECO:0000313|EMBL:CCY18570.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
bacterial regulatory protein, GntR family protein
L1_008_000M1_scaffold_1_263
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

312577..313446
DNA (870bp) protein (290aa)
ABC transporter n=2 Tax=Bifidobacterium RepID=A1A0N6_BIFAA
ABC transporter
ABC transporter {ECO:0000313|EMBL:BAF39269.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_1_264
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

313443..314390
DNA (948bp) protein (316aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A1A0N7_BIFAA
ytfF; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF39270.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_1_265
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

314757..315767
DNA (1011bp) protein (337aa)
Cystathionine beta-synthase n=2 Tax=Bifidobacterium RepID=A1A0N8_BIFAA
cystathionine beta-synthase
Cystathionine beta-synthase {ECO:0000313|EMBL:BAF39271.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_1_266
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

315870..317051
DNA (1182bp) protein (394aa)
Cystathionine gamma-synthase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0N9_BIFAA
cystathionine gamma-synthase
Cystathionine gamma-synthase {ECO:0000313|EMBL:AJE05502.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_267
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

317088..319112
DNA (2025bp) protein (675aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0P0_BIFAA
recQ; ATP-dependent DNA helicase RecQ
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:BAF39273.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L1_008_000M1_scaffold_1_268
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

319206..319691
DNA (486bp) protein (162aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
S-ribosylhomocysteine lyase n=2 Tax=Bifidobacterium RepID=A7A4M4_BIFAD
S-ribosylhomocysteinase
L1_008_000M1_scaffold_1_269
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

319820..320305
DNA (486bp) protein (162aa)
Uncharacterized protein n=2 Tax=Bifidobacterium adolescentis RepID=A1A0P2_BIFAA
hypothetical protein
Histone acetyltransferase {ECO:0000313|EMBL:KIM02063.1}; Serine O-acetyltransferase {ECO:0000313|EMBL:AII75930.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_008_000M1_scaffold_1_270
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(320386..321813)
DNA (1428bp) protein (476aa)
Amino acid transporter n=3 Tax=Bifidobacterium RepID=A7A4M6_BIFAD
putative amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:KFI96669.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Displaying items 241-270 of 309 in total

View Taxonomy