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L1_008_000M1_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 173 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_50_1
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(535..1722)
DNA (1188bp) protein (396aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E0H8_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCX82327.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_008_000M1_scaffold_50_2
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1887..2423
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DPW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82325.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_008_000M1_scaffold_50_3
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2541..3032
DNA (492bp) protein (164aa)
HD domain n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DTV7_9FIRM
HD domain {ECO:0000313|EMBL:CCX82324.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
HD domain.
L1_008_000M1_scaffold_50_4
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3299..5536
DNA (2238bp) protein (746aa)
formate acetyltransferase 1 (EC:2.3.1.54)
Formate acetyltransferase 1 n=3 Tax=root RepID=R5E0H3_9FIRM
Formate acetyltransferase 1 {ECO:0000313|EMBL:CCX82322.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_008_000M1_scaffold_50_5
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5536..6291
DNA (756bp) protein (252aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
pyruvate formate-lyase 1-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DPW3_9FIRM
L1_008_000M1_scaffold_50_6
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6836..7054
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L637_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15082.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_008_000M1_scaffold_50_7
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7366..8517)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DPV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82315.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_008_000M1_scaffold_50_8
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8533..9717)
DNA (1185bp) protein (395aa)
UDP-glucose dehydrogenase (EC:1.1.1.22)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DQ43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82313.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_008_000M1_scaffold_50_9
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9732..11495)
DNA (1764bp) protein (588aa)
Uncharacterized protein n=2 Tax=root RepID=R5E0G5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82312.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
decarboxylase
L1_008_000M1_scaffold_50_10
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11511..11669)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E275_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82311.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_008_000M1_scaffold_50_11
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11671..12750)
DNA (1080bp) protein (360aa)
Polysaccharide pyruvyl transferase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DPV4_9FIRM
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:CCX82310.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Polysaccharide pyruvyl transferase.
L1_008_000M1_scaffold_50_12
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12750..13664)
DNA (915bp) protein (305aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DTU2_9FIRM
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CCX82309.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Glycosyltransferases involved in cell wall biogenesis
L1_008_000M1_scaffold_50_13
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13688..15232)
DNA (1545bp) protein (515aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DQ38_9FIRM
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:CCX82308.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L1_008_000M1_scaffold_50_14
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15256..16080)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E0G1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82307.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_008_000M1_scaffold_50_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16099..17370)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E270_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82306.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_008_000M1_scaffold_50_16
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17383..18270)
DNA (888bp) protein (296aa)
Glycosyl transferase family 2 n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DPV0_9FIRM
Glycosyl transferase family 2 {ECO:0000313|EMBL:CCX82305.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
glycosyl transferase family protein
L1_008_000M1_scaffold_50_17
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18300..19433)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DTT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82304.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
glycosyl transferases group 1 family protein
L1_008_000M1_scaffold_50_18
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19447..20436)
DNA (990bp) protein (330aa)
Lipopolysaccharide biosynthesis proteins LPS:glycosyltransferases n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E0F7_9FIRM
Lipopolysaccharide biosynthesis proteins LPS:glycosyltransferases {ECO:0000313|EMBL:CCX82302.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases
L1_008_000M1_scaffold_50_19
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20466..21038)
DNA (573bp) protein (191aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3 5-epimerase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DPU4_9FIRM
dTDP-4-dehydrorhamnose 3 5-epimerase {ECO:0000313|EMBL:CCX82300.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_008_000M1_scaffold_50_20
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21063..21983)
DNA (921bp) protein (307aa)
Nucleoside-diphosphate-sugar epimerases n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L653_9FIRM
Nucleoside-diphosphate-sugar epimerases
Nucleoside-diphosphate-sugar epimerases {ECO:0000313|EMBL:CBL15098.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_008_000M1_scaffold_50_21
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22015..23061)
DNA (1047bp) protein (349aa)
CDP-glucose 4,6-dehydratase (EC:4.2.1.45)
CDP-glucose 4 6-dehydratase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E0F3_9FIRM
CDP-glucose 4 6-dehydratase {ECO:0000313|EMBL:CCX82297.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_008_000M1_scaffold_50_22
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23058..23837)
DNA (780bp) protein (260aa)
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
Glucose-1-phosphate cytidylyltransferase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DTS7_9FIRM
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:CCX82294.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L1_008_000M1_scaffold_50_23
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23850..24155)
DNA (306bp) protein (102aa)
Sugar transferases involved in lipopolysaccharide synthesis (EC:2.7.8.6)
Sugar transferases involved in lipopolysaccharide synthesis {ECO:0000313|EMBL:CBL15100.1}; EC=2.7.8.6 {ECO:0000313|EMBL:CBL15100.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Sugar transferases involved in lipopolysaccharide synthesis n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L655_9FIRM
L1_008_000M1_scaffold_50_24
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24396..25109)
DNA (714bp) protein (238aa)
Capsular exopolysaccharide family n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DPT4_9FIRM
Capsular exopolysaccharide family {ECO:0000313|EMBL:CCX82290.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
capsular exopolysaccharide family
L1_008_000M1_scaffold_50_25
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25132..25854)
DNA (723bp) protein (241aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DTS2_9FIRM
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:CCX82289.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Capsular polysaccharide biosynthesis protein
L1_008_000M1_scaffold_50_26
unknown

Not on your lists

26006..26152
DNA (147bp) protein (49aa)

This feature has no annotations

L1_008_000M1_scaffold_50_27
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26670..27260
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L658_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15103.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_008_000M1_scaffold_50_28
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27266..27991
DNA (726bp) protein (242aa)
LPXTG-site transpeptidase (Sortase) family protein n=3 Tax=root RepID=D4L659_9FIRM
LPXTG-site transpeptidase (sortase) family protein
LPXTG-site transpeptidase (Sortase) family protein {ECO:0000313|EMBL:CBL15104.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_008_000M1_scaffold_50_29
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27991..28821
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DTR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82284.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L1_008_000M1_scaffold_50_30
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29025..29798)
DNA (774bp) protein (258aa)
hydrolase, TatD family (EC:3.1.21.-)
Hydrolase, TatD family {ECO:0000313|EMBL:CBL15106.1}; EC=3.1.21.- {ECO:0000313|EMBL:CBL15106.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Hydrolase, TatD family n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L661_9FIRM
Displaying items 1-30 of 173 in total

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