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L1_008_000M1_scaffold_80

Search features with annotation key words

Displaying items 61-90 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_80_61
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(80451..82262)
DNA (1812bp) protein (604aa)
FadD Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:KFI42396.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KFI42396.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
fadD; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Putative long-chain-fatty-acid--CoA ligase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HB93_BIFBI
L1_008_000M1_scaffold_80_62
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

82723..82959
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V7S4_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR49666.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L1_008_000M1_scaffold_80_63
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

83543..84262
DNA (720bp) protein (240aa)
tam; trans-aconitate 2-methyl transferase (EC:2.1.1.144)
Trans-aconitate 2-methyl transferase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HUV6_BIFBI
Trans-aconitate 2-methyl transferase {ECO:0000313|EMBL:EKE51308.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L1_008_000M1_scaffold_80_64
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

84814..86061
DNA (1248bp) protein (416aa)
DNA-binding helix-turn-helix protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V7S6_BIFBI
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFR49668.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
transcriptional regulator
L1_008_000M1_scaffold_80_65
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

86910..87233
DNA (324bp) protein (108aa)
RelB antitoxin domain n=3 Tax=Bifidobacterium RepID=K2I8P0_BIFBI
Hypothetical protein with RelB antitoxin domain
Uncharacterized protein {ECO:0000313|EMBL:CDB22541.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_80_66
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

87789..88532
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MV50_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF15923.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
MerR family transcriptional regulator
L1_008_000M1_scaffold_80_67
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(88713..90035)
DNA (1323bp) protein (441aa)
MFS superfamily transporter n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MF91_BIFBI
MFS superfamily transporter {ECO:0000313|EMBL:EKF15922.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
MFS superfamily transporter
L1_008_000M1_scaffold_80_68
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

90426..91067
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4V7T4_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR49676.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L1_008_000M1_scaffold_80_69
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(91007..92065)
DNA (1059bp) protein (353aa)
Ribokinase family sugar kinase n=2 Tax=Bifidobacterium RepID=E3ENP0_BIFBS
rbsK1; ribokinase family sugar kinase
Ribokinase family sugar kinase {ECO:0000313|EMBL:CDB22536.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_80_70
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


92325..92519
DNA (195bp) protein (65aa)
50S ribosomal protein L28 n=7 Tax=Bifidobacterium RepID=E3ENP1_BIFBS
rpmB1; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L1_008_000M1_scaffold_80_71
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

92639..95335
DNA (2697bp) protein (899aa)
Putative ATP-dependent DNA helicase RecG n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2BVL5_BIFBI
ATP-dependent DNA helicase {ECO:0000313|EMBL:BAQ97520.1}; Putative ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:ERI82219.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
recG; ATP-dependent DNA helicase
L1_008_000M1_scaffold_80_72
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

95516..96823
DNA (1308bp) protein (436aa)
APC family amino acid-polyamine-organocation transporter n=3 Tax=Bifidobacterium bifidum RepID=I3WG83_BIFBI
Putative amino acid transport protein {ECO:0000313|EMBL:BAQ97521.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
APC family amino acid-polyamine-organocation transporter
L1_008_000M1_scaffold_80_73
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96873..97046
DNA (174bp) protein (58aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=I3WG84_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL03897.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_80_74
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

97284..98372
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WG85_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ97522.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L1_008_000M1_scaffold_80_75
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

98436..100346
DNA (1911bp) protein (637aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2I8N0_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE51294.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L1_008_000M1_scaffold_80_76
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

100355..101992
DNA (1638bp) protein (546aa)
Sodium/dicarboxylate symporter family protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZE5_BIFBP
sodium/dicarboxylate symporter family protein
Sodium:dicarboxylate symporter protein {ECO:0000313|EMBL:AFL03900.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_80_77
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

102303..102965
DNA (663bp) protein (221aa)
RNA methyltransferase, RsmD family n=3 Tax=Bifidobacterium bifidum RepID=E4V7U2_BIFBI
Methyltransferase {ECO:0000313|EMBL:EKF16442.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
putative methyl transferase
L1_008_000M1_scaffold_80_78
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

103194..103796
DNA (603bp) protein (201aa)
Oxidoreductase/nitroreductase n=2 Tax=Bifidobacterium RepID=E4NZE7_BIFBP
oxidoreductase/nitroreductase
Oxidoreductase/nitroreductase {ECO:0000313|EMBL:CDB22527.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_80_79
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(103947..104399)
DNA (453bp) protein (151aa)
Hsp20-family heat shock chaperone n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GMS5_9BIFI
Hsp20-family heat shock chaperone {ECO:0000313|EMBL:CDB22526.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Hsp20-family heat shock chaperone
L1_008_000M1_scaffold_80_80
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(104646..105644)
DNA (999bp) protein (333aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014918}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014917};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I8M6_BIFBI
tRNA (guanine-N1)-methyltransferase
L1_008_000M1_scaffold_80_81
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(105895..106509)
DNA (615bp) protein (205aa)
Ribosome maturation factor RimM n=3 Tax=Bifidobacterium RepID=E3ENQ2_BIFBS
rimM; 16S rRNA processing protein rimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_80_82
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(106506..106739)
DNA (234bp) protein (78aa)
UPF0109 protein BBIF_0340 n=8 Tax=Bifidobacterium RepID=E3ENQ3_BIFBS
RNA-binding protein
UPF0109 protein BBCT_0186 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L1_008_000M1_scaffold_80_83
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(106742..107185)
DNA (444bp) protein (148aa)
30S ribosomal protein S16 n=5 Tax=Bifidobacterium RepID=E3ENQ4_BIFBS
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L1_008_000M1_scaffold_80_84
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(107763..109292)
DNA (1530bp) protein (510aa)
multiple substrate aminotransferase (EC:2.6.1.39)
Multiple substrate aminotransferase (MsaT) containing domain of GntR family n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZF3_BIFBP
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFR49692.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L1_008_000M1_scaffold_80_85
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

109495..110187
DNA (693bp) protein (231aa)
Arginine exporter n=3 Tax=Bifidobacterium bifidum RepID=I3WG96_BIFBI
argO; arginine exporter
L-lysine transport protein {ECO:0000313|EMBL:BAQ97533.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L1_008_000M1_scaffold_80_86
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(110457..111629)
DNA (1173bp) protein (391aa)
Endonuclease/exonuclease/phosphatase n=3 Tax=Bifidobacterium bifidum RepID=I3WG97_BIFBI
hypothetical protein
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:AFL03910.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_80_87
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(111805..113451)
DNA (1647bp) protein (549aa)
Signal recognition particle protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENQ8_BIFBS
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
ffh; Signal recognition particle, subunit FFH/SRP54
L1_008_000M1_scaffold_80_88
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113812..114720
DNA (909bp) protein (303aa)
Cation efflux protein n=4 Tax=Bifidobacterium bifidum RepID=I3WG99_BIFBI
cation efflux protein
Membrane spanning protein {ECO:0000313|EMBL:KFI42423.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L1_008_000M1_scaffold_80_89
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(114949..116571)
DNA (1623bp) protein (541aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Cysteine--tRNA ligase n=3 Tax=Bifidobacterium RepID=E3ENR0_BIFBS
cysS; cysteinyl-tRNA synthetase
L1_008_000M1_scaffold_80_90
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

116718..117443
DNA (726bp) protein (242aa)
guaAA; GMP synthase subunit A (EC:6.3.5.2)
GMP synthase subunit A {ECO:0000313|EMBL:AFL03914.1}; EC=6.3.5.2 {ECO:0000313|EMBL:AFL03914.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
GMP synthase subunit A n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WGA1_BIFBI
Displaying items 61-90 of 106 in total

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