name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L1_008_000M1_scaffold_85_31
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(51874..52857)
|
Chromosome partitioning protein ParA n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GBQ1_9BIFI
Chromosome partitioning protein ParA {ECO:0000313|EMBL:CDB22868.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
parA; chromosome partitioning protein ParA
|
|
L1_008_000M1_scaffold_85_32
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(53318..54016)
|
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ERI1_BIFBS
gidB; Methyltransferase GidB (glucose inhibited division protein B)
|
|
L1_008_000M1_scaffold_85_33
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(54013..54543)
|
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=K2HB25_BIFBI
hypothetical protein
R3H domain protein {ECO:0000313|EMBL:ERI84277.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99034.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
|
|
L1_008_000M1_scaffold_85_34
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(54625..55635)
|
Membrane protein n=5 Tax=Bifidobacterium RepID=I3WKL6_BIFBI
oxaA; membrane protein
Membrane protein insertase, YidC/Oxa1 family {ECO:0000313|EMBL:ERI84276.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99035.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
|
|
L1_008_000M1_scaffold_85_35
unknown
|
Not on your lists |
55965..56381
|
This feature has no annotations |
|
L1_008_000M1_scaffold_85_36
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(56338..56472)
|
50S ribosomal protein L34 n=8 Tax=Bifidobacterium RepID=E3ERI4_BIFBS
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
|
|
L1_008_000M1_scaffold_85_37
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
56825..58414
|
Chromosomal replication initiator protein DnaA n=3 Tax=Bifidobacterium bifidum RepID=I3WFD5_BIFBI
dnaA; chromosomal replication initiator protein
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
|
|
L1_008_000M1_scaffold_85_38
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
59014..60138
|
dnaN; DnaN DNA polymerase III, beta chain (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
DNA polymerase III subunit beta n=7 Tax=Bifidobacterium RepID=E3ENC8_BIFBS
|
|
L1_008_000M1_scaffold_85_39
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
60226..61539
|
DNA replication and repair protein RecF n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXQ2_BIFBP
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
recF; RecF DNA replication and repair protein
|
|
L1_008_000M1_scaffold_85_40
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
61536..62108
|
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2C1E2_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI42132.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
|
|
L1_008_000M1_scaffold_85_41
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
62310..64421
|
gyrB; gyrB DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
DNA gyrase subunit B n=8 Tax=Bifidobacterium RepID=E3END1_BIFBS
|
|
L1_008_000M1_scaffold_85_42
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
64560..67292
|
gyrA; GyrA DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
DNA gyrase subunit A n=4 Tax=Bifidobacterium bifidum RepID=E4NXQ5_BIFBP
|
|
L1_008_000M1_scaffold_85_43
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
67352..67909
|
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=I3WFE2_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB22857.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
|
|
L1_008_000M1_scaffold_85_44
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(68272..68526)
|
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GNM6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB22856.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
alpha-L-arabinofuranosidase
|
|
L1_008_000M1_scaffold_85_45
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
68605..69087
|
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CIB0_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI42136.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
|
|
L1_008_000M1_scaffold_85_46
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(69504..70418)
|
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2I8J3_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52214.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L1_008_000M1_scaffold_85_47
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(70680..71708)
|
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DRQ9_BIFBI
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ERI84262.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
celR; HTH-type transcriptional regulator
|
|
L1_008_000M1_scaffold_85_48
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
72177..73328
|
Lysophospholipase L2 n=3 Tax=Bifidobacterium bifidum RepID=E4NXR0_BIFBP
putative lysophospholipase
Putative lysophospholipase {ECO:0000313|EMBL:EKF16547.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
|
|
L1_008_000M1_scaffold_85_49
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(73377..73535)
|
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2C1D5_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI84259.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
|
|
L1_008_000M1_scaffold_85_50
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(73780..74034)
|
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2M2F0_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52218.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L1_008_000M1_scaffold_85_51
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(74047..74307)
|
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2LZT1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52219.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L1_008_000M1_scaffold_85_52
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(74410..74625)
|
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENE2_BIFBS
the helix-turn-helix motif
Uncharacterized protein {ECO:0000313|EMBL:ADO52220.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L1_008_000M1_scaffold_85_53
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(74636..74989)
|
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=I3WFF0_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL03613.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
|
|
L1_008_000M1_scaffold_85_54
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
75243..75752
|
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=I3WFF1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL03614.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
|
|
L1_008_000M1_scaffold_85_55
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
75790..76452
|
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENE5_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52223.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L1_008_000M1_scaffold_85_56
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(76269..77615)
|
gdh; NADP-specific glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=2 Tax=Bifidobacterium bifidum RepID=I3WFF3_BIFBI
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
|
|
L1_008_000M1_scaffold_85_57
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(77719..78519)
|
FCD domain protein n=3 Tax=Bifidobacterium bifidum RepID=U2CI99_BIFBI
yieP; putative HTH-type transcriptional regulator
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:AFL03617.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
|
|
L1_008_000M1_scaffold_85_58
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
78573..79007
|
Large-conductance mechanosensitive channel n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENE8_BIFBS
large-conductance mechanosensitive channel
Large-conductance mechanosensitive channel {ECO:0000256|SAAS:SAAS00023935}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L1_008_000M1_scaffold_85_59
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(79383..82880)
|
alpha-L-arabinofuranosidase (EC:3.2.1.55)
Alpha-L-arabinofuranosidase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2INK8_BIFBI
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:EKE50345.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
|
|
L1_008_000M1_scaffold_85_60
unknown
|
Not on your lists |
comp(82969..83208)
|
This feature has no annotations |