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L1_008_000M1_scaffold_85

Search features with annotation key words

Displaying items 61-90 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_85_61
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(83389..83520)
DNA (132bp) protein (44aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=I3WFF7_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL03620.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_85_62
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

83633..85969
DNA (2337bp) protein (779aa)
nagZ; NagZ Beta-N-acetylhexosaminidase (EC:3.2.1.52)
glycoside hydrolase n=1 Tax=Bifidobacterium bifidum RepID=UPI0001976F13
NagZ Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:CDB22359.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_85_63
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(85876..86226)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GA95_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB22358.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_85_64
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86442..87494)
DNA (1053bp) protein (351aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium RepID=E3ENF1_BIFBS
LacI family transcriptional regulator
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDB22357.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_85_65
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

87824..88273
DNA (450bp) protein (150aa)
Ascorbate-specific phospho transferase enzyme IIA component n=2 Tax=Bifidobacterium RepID=I3WFG0_BIFBI
ulaC; ascorbate-specific phospho transferase enzyme IIA component
Ascorbate-specific phospho transferase enzyme IIA component {ECO:0000313|EMBL:CDB22356.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_85_66
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

88397..88669
DNA (273bp) protein (91aa)
PTS system lactose/cellobiose specific transporter subunit IIB (EC:2.7.1.69)
PTS system, ascorbate-specific IIB component n=4 Tax=Bifidobacterium bifidum RepID=E3ENF3_BIFBS
PTS system lactose/cellobiose-specific transporter subunit IIB {ECO:0000313|EMBL:EKE50340.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L1_008_000M1_scaffold_85_67
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

88735..90252
DNA (1518bp) protein (506aa)
PTS system, ascorbate-specific IIC componet n=3 Tax=Bifidobacterium RepID=E3ENF4_BIFBS
PTS system, ascorbate-specific IIC componet
PTS system ascorbate-specific IIC componet {ECO:0000313|EMBL:CDB22354.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_85_68
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

90529..91278
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VCD8_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR51253.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
putative metal-dependent hydrolase
L1_008_000M1_scaffold_85_69
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(91466..91945)
DNA (480bp) protein (160aa)
DNA-binding ferritin-like protein for protection from oxidative damage, Dps family protein n=7 Tax=Bifidobacterium RepID=E3ENF6_BIFBS
dps; DNA protection during starvation protein
Ferritin-like protein {ECO:0000313|EMBL:EFR51254.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L1_008_000M1_scaffold_85_70
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

92387..93460
DNA (1074bp) protein (358aa)
Inner membrane protein n=4 Tax=Bifidobacterium bifidum RepID=I3WFG5_BIFBI
yddG; inner membrane protein
Inner membrane protein {ECO:0000313|EMBL:AFL03628.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_85_71
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(93496..94818)
DNA (1323bp) protein (441aa)
Conserved hypothetical membrane spanning protein with DUF21 and CBS domains n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GDA5_9BIFI
Conserved hypothetical membrane spanning protein with DUF21 and CBS domains {ECO:0000313|EMBL:CDB22350.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
putative transport protein
L1_008_000M1_scaffold_85_72
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(95027..95602)
DNA (576bp) protein (192aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VCE2_BIFBI
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFR51257.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
putative HTH-type transcriptional regulator
L1_008_000M1_scaffold_85_73
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(95719..96468)
DNA (750bp) protein (250aa)
cynT; carbonic anhydrase (EC:4.2.1.1)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Carbonic anhydrase n=6 Tax=Bifidobacterium RepID=I3WFG8_BIFBI
L1_008_000M1_scaffold_85_74
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96685..97248
DNA (564bp) protein (188aa)
ahpC; peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin {ECO:0000313|EMBL:EFR51259.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EFR51259.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Alkyl hydroperoxide reductase C22 protein n=8 Tax=Bifidobacterium RepID=E3ENG1_BIFBS
L1_008_000M1_scaffold_85_75
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

97591..99504
DNA (1914bp) protein (638aa)
trxB; TrxB Thioredoxin reductase/Thioredoxin/glutaredoxin family protein (EC:1.8.1.9)
TrxB Thioredoxin reductase/Thioredoxin/Glutaredoxin family protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NY07_BIFBP
Thioredoxin reductase/Thioredoxin/Glutaredoxin family protein {ECO:0000313|EMBL:ADO52240.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_85_76
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(99799..101085)
DNA (1287bp) protein (429aa)
Transporter, major facilitator family protein n=3 Tax=Bifidobacterium bifidum RepID=E4VCE7_BIFBI
Inner membrane protein {ECO:0000313|EMBL:EKE50330.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
yhjX; inner membrane protein
L1_008_000M1_scaffold_85_77
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(101583..104339)
DNA (2757bp) protein (919aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
ppc; phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=3 Tax=Bifidobacterium bifidum RepID=K2I691_BIFBI
L1_008_000M1_scaffold_85_78
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

104750..106747
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFH5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL03638.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_85_79
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(106820..108418)
DNA (1599bp) protein (533aa)
Putative metal-dependent hydrolase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFH6_BIFBI
putative metal-dependent hydrolase
Putative metal-dependent hydrolase {ECO:0000313|EMBL:AFL03639.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_85_80
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

108831..109850
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GN05_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB23039.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L1_008_000M1_scaffold_85_81
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(110325..111422)
DNA (1098bp) protein (366aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:AFL03641.1}; EC=6.1.1.2 {ECO:0000313|EMBL:AFL03641.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Tryptophanyl-tRNA synthetase n=2 Tax=Bifidobacterium bifidum RepID=I3WFH8_BIFBI
L1_008_000M1_scaffold_85_82
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

111563..111943
DNA (381bp) protein (127aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WFH9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52248.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_85_83
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

112192..112407
DNA (216bp) protein (72aa)
Putative response regulatory protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFI0_BIFBI
putative response regulatory protein
Putative response regulatory protein {ECO:0000313|EMBL:AFL03643.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_85_84
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

112430..112705
DNA (276bp) protein (92aa)
Two-component response regulator n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M5E5_BIFBI
Two-component response regulator {ECO:0000313|EMBL:EKF16270.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
putative response regulatory protein
L1_008_000M1_scaffold_85_85
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

112788..113393
DNA (606bp) protein (202aa)
histidine kinase-related ATPase (EC:2.7.13.3)
Putative ATP-binding region, ATPase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFI1_BIFBI
Putative ATP-binding region, ATPase {ECO:0000313|EMBL:AFL03644.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_85_86
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113569..114606
DNA (1038bp) protein (346aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HRF1_BIFBI
dTDP-glucose 4,6-dehydratase
L1_008_000M1_scaffold_85_87
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(114618..114833)
DNA (216bp) protein (72aa)
Putative O-acyl transferase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFI3_BIFBI
putative O-acyl transferase
Putative O-acyl transferase {ECO:0000313|EMBL:AFL03646.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_85_88
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

114949..117537
DNA (2589bp) protein (863aa)
1,4-beta-N-acetylmuramidase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENH5_BIFBS
lytC; 1,4-beta-N-acetylmuramidase
1,4-beta-N-acetylmuramidase {ECO:0000313|EMBL:ADO52253.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_85_89
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(117610..118554)
DNA (945bp) protein (315aa)
Glycosyl transferase, family 2 n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ENH6_BIFBS
family 2 glycosyl transferase
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ADO52254.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_85_90
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

118921..121104
DNA (2184bp) protein (728aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IM07_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE49785.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
Displaying items 61-90 of 95 in total

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