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L1_008_000M1_scaffold_117

Search features with annotation key words

Displaying items 61-90 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_117_61
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65199..67337
DNA (2139bp) protein (713aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EEG92692.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EEG92692.1};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Glutamate--ammonia ligase, catalytic domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FXJ8_9FIRM
glutamine synthetase catalytic region
L1_008_000M1_scaffold_117_62
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

67472..69238
DNA (1767bp) protein (589aa)
Nitrogen regulatory protein P-II n=1 Tax=Firmicutes bacterium CAG:194 RepID=R5QL68_9FIRM
Ammonium transporter {ECO:0000313|EMBL:ETP72478.1}; Flags: Precursor;; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
ammonium transporter
L1_008_000M1_scaffold_117_63
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(69368..72091)
DNA (2724bp) protein (908aa)
penicillin-binding protein, 1A family (EC:2.4.1.- 3.4.-.-)
Penicillin-binding protein 1A family n=1 Tax=Roseburia sp. CAG:45 RepID=R6NBA2_9FIRM
Penicillin-binding protein 1A family {ECO:0000313|EMBL:CDC09388.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L1_008_000M1_scaffold_117_64
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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72262..72915
DNA (654bp) protein (218aa)
Thymidylate synthase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T1Y6_ROSHA
thymidylate synthase
Thymidylate synthase {ECO:0000313|EMBL:AEN95630.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_117_65
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

73375..74091
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7R100_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF43220.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
acyl-ACP thioesterase
L1_008_000M1_scaffold_117_66
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

74084..74920
DNA (837bp) protein (279aa)
S1 RNA binding domain protein n=2 Tax=Roseburia RepID=C0FS56_9FIRM
S1 RNA binding domain containing protein
Uncharacterized protein {ECO:0000313|EMBL:CCY29618.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L1_008_000M1_scaffold_117_67
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

74950..75324
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QZX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF43218.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
endoribonuclease L-PSP
L1_008_000M1_scaffold_117_68
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

75336..76253
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0IXQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT24712.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hypothetical protein
L1_008_000M1_scaffold_117_69
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(76353..76541)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A7F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ24141.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L1_008_000M1_scaffold_117_70
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

77071..77985
DNA (915bp) protein (305aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IL31_9CLOT
L1_008_000M1_scaffold_117_71
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

78111..79331
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0IVV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT24709.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
NLP/P60 family protein
L1_008_000M1_scaffold_117_72
unknown

Not on your lists

79341..79541
DNA (201bp) protein (67aa)

This feature has no annotations

L1_008_000M1_scaffold_117_73
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

79993..80676
DNA (684bp) protein (228aa)
Teichoic acid biosynthesis proteins (EC:2.4.1.187)
Teichoic acid biosynthesis proteins n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HIP4_9FIRM
Teichoic acid biosynthesis proteins {ECO:0000313|EMBL:CCY29615.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L1_008_000M1_scaffold_117_74
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

80679..81545
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QVD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF42512.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
hypothetical protein
L1_008_000M1_scaffold_117_75
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

81687..82775
DNA (1089bp) protein (363aa)
Transcriptional regulator CdaR family n=1 Tax=Roseburia sp. CAG:45 RepID=R6NDY9_9FIRM
Transcriptional regulator CdaR family {ECO:0000313|EMBL:CDC09355.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
transcriptional regulator, CdaR family
L1_008_000M1_scaffold_117_76
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

82793..83476
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6PHV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC09352.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
putative ATPase involved in cell division
L1_008_000M1_scaffold_117_77
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

83466..84374
DNA (909bp) protein (303aa)
Cell division protein FtsX n=1 Tax=Roseburia sp. CAG:182 RepID=R7QYL7_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
cell division transport system permease
L1_008_000M1_scaffold_117_78
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

84435..85700
DNA (1266bp) protein (422aa)
Membrane-bound metallopeptidase n=1 Tax=Roseburia sp. CAG:45 RepID=R6NDX6_9FIRM
Membrane-bound metallopeptidase {ECO:0000313|EMBL:CDC09345.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
metallopeptidase M23 family protein
L1_008_000M1_scaffold_117_79
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

85790..87070
DNA (1281bp) protein (427aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NT01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC09341.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L1_008_000M1_scaffold_117_80
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

87215..88210
DNA (996bp) protein (332aa)
Peptide chain release factor 2 n=1 Tax=Eubacterium sp. 14-2 RepID=S0JN41_9FIRM
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
bacterial peptide chain release factor 2 (bRF-2)
L1_008_000M1_scaffold_117_81
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

88863..89306
DNA (444bp) protein (148aa)
ACT domain-containing protein (EC:5.4.99.5)
UPF0735 ACT domain-containing protein BN683_01406 n=2 Tax=Clostridiales RepID=R5U5K0_9FIRM
UPF0735 ACT domain-containing protein HMPREF0373_02132 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L1_008_000M1_scaffold_117_82
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

89311..90513
DNA (1203bp) protein (401aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
Homoserine dehydrogenase n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KIW5_9FIRM
homoserine dehydrogenase
L1_008_000M1_scaffold_117_83
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

90526..91725
DNA (1200bp) protein (400aa)
Proposed homoserine kinase n=1 Tax=Roseburia sp. CAG:182 RepID=R7R1S2_9FIRM
Proposed homoserine kinase {ECO:0000313|EMBL:CDF43888.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
proposed homoserine kinase
L1_008_000M1_scaffold_117_84
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

91771..92976
DNA (1206bp) protein (402aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
aspartate kinase, monofunctional class (EC:2.7.2.4)
Aspartokinase n=1 Tax=Eubacterium sp. 14-2 RepID=S0J699_9FIRM
L1_008_000M1_scaffold_117_85
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(93033..93761)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NB25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC09298.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L1_008_000M1_scaffold_117_86
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(93786..94241)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4J2Z6_BUTFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK74485.1}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
L1_008_000M1_scaffold_117_87
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(94267..94647)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6PHQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC09297.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L1_008_000M1_scaffold_117_88
unknown

Not on your lists

94805..95269
DNA (465bp) protein (155aa)

This feature has no annotations

L1_008_000M1_scaffold_117_89
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

95767..97914
DNA (2148bp) protein (716aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NSV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC09296.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Transcriptional accessory protein
L1_008_000M1_scaffold_117_90
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

97939..98541
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QZX2_9FIRM
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
Predicted membrane protein
Displaying items 61-90 of 99 in total

View Taxonomy