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L1_008_000M1_scaffold_117

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_117_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..526
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG91771.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L1_008_000M1_scaffold_117_2
Treponema maltophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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1154..1474
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Treponema maltophilum ATCC 51939 RepID=S3K0X6_TREMA
Uncharacterized protein {ECO:0000313|EMBL:EPF31913.1}; TaxID=1125699 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema maltophilum ATCC 51939.;"
Acetyltransferase (GNAT) family.
L1_008_000M1_scaffold_117_3

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1507..1632
DNA (126bp) protein (42aa)
Acetyltransferase (GNAT) family (Fragment) n=1 Tax=human gut metagenome RepID=K1TNH4_9ZZZZ
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:EKC60866.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_117_4
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1940..3382
DNA (1443bp) protein (481aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
Proline--tRNA ligase n=1 Tax=Eubacterium sp. 14-2 RepID=S0J7I4_9FIRM
hypothetical protein
L1_008_000M1_scaffold_117_5
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3429..4760
DNA (1332bp) protein (444aa)
PolyA polymerase family protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6PPM5_9FIRM
PolyA polymerase family protein {ECO:0000313|EMBL:CDC11732.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
tRNA nucleotidyltransferase
L1_008_000M1_scaffold_117_6
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4823..5803
DNA (981bp) protein (327aa)
Spore coat protein CotS family n=1 Tax=Roseburia sp. CAG:182 RepID=R7R178_9FIRM
Spore coat protein CotS family {ECO:0000313|EMBL:CDF43300.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
spore coat protein, CotS family
L1_008_000M1_scaffold_117_7
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5878..7257
DNA (1380bp) protein (460aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T1U2_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95586.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_117_8
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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7285..9018
DNA (1734bp) protein (578aa)
alpha-phosphoglucomutase (EC:5.4.2.8 5.4.2.2)
Phosphoglucomutase n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KMT3_9FIRM
Phosphoglucomutase {ECO:0000313|EMBL:EOS47648.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
L1_008_000M1_scaffold_117_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9135..9410
DNA (276bp) protein (92aa)
Bacterial nucleoid DNA-binding protein n=4 Tax=Roseburia RepID=D4KPA3_9FIRM
Bacterial nucleoid DNA-binding protein
Bacterial nucleoid DNA-binding protein {ECO:0000313|EMBL:CDA56448.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_117_10
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9485..9724
DNA (240bp) protein (80aa)
S4 domain protein n=2 Tax=Clostridiales RepID=B0NEU9_CLOSV
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
Uncharacterized protein {ECO:0000313|EMBL:EGN38949.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_008_000M1_scaffold_117_11
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9797..10081
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QYJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF43304.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
sporulation protein YabP
L1_008_000M1_scaffold_117_12
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10078..10467
DNA (390bp) protein (130aa)
Spore cortex protein YabQ (Spore_YabQ) n=1 Tax=Roseburia sp. CAG:182 RepID=R7R183_9FIRM
Spore cortex protein YabQ (Spore_YabQ) {ECO:0000313|EMBL:CDF43305.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
Spore cortex protein YabQ (Spore_YabQ).
L1_008_000M1_scaffold_117_13
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10504..10803
DNA (300bp) protein (100aa)
Septum formation initiator n=1 Tax=Roseburia sp. CAG:45 RepID=R6NZL3_9FIRM
Septum formation initiator.
Septum formation initiator {ECO:0000313|EMBL:CDC11721.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L1_008_000M1_scaffold_117_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10906..11211
DNA (306bp) protein (102aa)
Uncharacterized protein n=6 Tax=Clostridiales RepID=B0NZF0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGA91500.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000M1_scaffold_117_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11265..11672
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25062.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
conserved membrane protein of unknown function
L1_008_000M1_scaffold_117_16
unknown

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11800..12063
DNA (264bp) protein (88aa)

This feature has no annotations

L1_008_000M1_scaffold_117_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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12104..13201
DNA (1098bp) protein (366aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CB13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34323.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_008_000M1_scaffold_117_18
Paenibacillus sp. TCA20, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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13254..13571
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5XWK9_9FIRM
Cytoplasmic protein {ECO:0000313|EMBL:GAK40391.1}; TaxID=1499968 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. TCA20.;"
hypothetical protein
L1_008_000M1_scaffold_117_19
unknown

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13605..14390
DNA (786bp) protein (262aa)

This feature has no annotations

L1_008_000M1_scaffold_117_20
unknown

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comp(14410..14658)
DNA (249bp) protein (83aa)

This feature has no annotations

L1_008_000M1_scaffold_117_21
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14844..16673
DNA (1830bp) protein (610aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7R065_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF43308.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
L1_008_000M1_scaffold_117_22
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16673..18076
DNA (1404bp) protein (468aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A7C4_9FIRM
cell cycle protein MesJ
L1_008_000M1_scaffold_117_23
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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18069..18596
DNA (528bp) protein (176aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Blautia sp. CAG:37 RepID=R7JQK0_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDE65883.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
L1_008_000M1_scaffold_117_24
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18611..20437
DNA (1827bp) protein (609aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Roseburia sp. CAG:45 RepID=R6NKH9_9FIRM
ATP-dependent metalloprotease FtsH
L1_008_000M1_scaffold_117_25
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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20767..22890
DNA (2124bp) protein (708aa)
Glycosidases (EC:3.2.1.20)
Glycosidases n=1 Tax=Roseburia sp. CAG:45 RepID=R6NM78_9FIRM
Glycosidases {ECO:0000313|EMBL:CDC12350.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L1_008_000M1_scaffold_117_26
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23380..26517
DNA (3138bp) protein (1046aa)
Conserved protein n=1 Tax=Clostridium sp. CAG:167 RepID=R5VI53_9CLOT
Conserved protein {ECO:0000313|EMBL:CCZ90080.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
Fibronectin type III domain./Regulator of chromosome condensation (RCC1) repeat.
L1_008_000M1_scaffold_117_27
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26611..27606)
DNA (996bp) protein (332aa)
Transcriptional regulators (EC:5.1.1.1)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6PRB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12347.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L1_008_000M1_scaffold_117_28
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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27809..29095
DNA (1287bp) protein (429aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Coprococcus sp. CAG:131 RepID=R6KX35_9FIRM
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK83085.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L1_008_000M1_scaffold_117_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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29136..29702
DNA (567bp) protein (189aa)
Transcriptional regulator n=3 Tax=Roseburia RepID=D4KPJ0_9FIRM
transcriptional regulator
Putative dihydroxyacetone kinase regulator {ECO:0000313|EMBL:EEV01790.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000M1_scaffold_117_30
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29838..31814
DNA (1977bp) protein (659aa)
Myosin-cross-reactive antigen n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T1V8_ROSHA
myosin-cross-reactive antigen
Myosin-cross-reactive antigen {ECO:0000313|EMBL:AEN95602.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Displaying items 1-30 of 99 in total

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