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L1_008_000M1_scaffold_120

Search features with annotation key words

Displaying items 91-100 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_120_91
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(93726..94373)
DNA (648bp) protein (216aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:CBK97604.1}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:CBK97604.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWY5_9FIRM
L1_008_000M1_scaffold_120_92
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(94543..95343)
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWY7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97606.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_120_93
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(95370..95966)
DNA (597bp) protein (199aa)
Recombination protein RecR n=5 Tax=root RepID=D4JWY8_9FIRM
recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L1_008_000M1_scaffold_120_94
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(95966..96316)
DNA (351bp) protein (117aa)
Nucleoid-associated protein EUS_26710 n=4 Tax=Eubacterium RepID=D4JWY9_9FIRM
conserved hypothetical protein TIGR00103
Nucleoid-associated protein BN788_00292 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L1_008_000M1_scaffold_120_95
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(96352..98562)
DNA (2211bp) protein (737aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EDS00490.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EDS00490.1};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
DNA polymerase III, subunit gamma and tau n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPA0_9FIRM
DNA polymerase III, subunits gamma and tau
L1_008_000M1_scaffold_120_96
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(98940..100202)
DNA (1263bp) protein (421aa)
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:EDS00491.1}; EC=3.5.-.- {ECO:0000313|EMBL:EDS00491.1};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
amidase, hydantoinase/carbamoylase family (EC:3.5.1.87)
Amidase, hydantoinase/carbamoylase family n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPA1_9FIRM
L1_008_000M1_scaffold_120_97
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(100526..101455)
DNA (930bp) protein (310aa)
cysteine synthase (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985, ECO:0000313|EMBL:CBK97610.1}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985, ECO:0000313|EMBL:CBK97610.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Cysteine synthase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWZ1_9FIRM
L1_008_000M1_scaffold_120_98

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comp(101908..102465)
DNA (558bp) protein (186aa)
pyridoxal phosphate synthase yaaE subunit (EC:2.6.-.-)
Glutamine amidotransferase subunit PdxT (Glutamineamidotransferase glutaminase subunit pdxT) n=1 Tax=human gut metagenome RepID=K1UB50_9ZZZZ
Glutamine amidotransferase subunit PdxT (Glutamineamidotransferase glutaminase subunit pdxT) {ECO:0000313|EMBL:EKC79418.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_008_000M1_scaffold_120_99
unknown

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102712..103146
DNA (435bp) protein (145aa)

This feature has no annotations

L1_008_000M1_scaffold_120_100
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(103124..103999)
DNA (876bp) protein (292aa)
pyridoxal phosphate synthase yaaD subunit (EC:4.-.-.-)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Pyridoxal biosynthesis lyase PdxS n=4 Tax=root RepID=D4JWZ4_9FIRM
Displaying items 91-100 of 100 in total

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