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L1_008_000M1_scaffold_120

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_120_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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593..1288
DNA (696bp) protein (232aa)
Cell Wall Hydrolase./Putative peptidoglycan binding domain. (EC:3.5.1.28)
Cell Wall Hydrolase./Putative peptidoglycan binding domain {ECO:0000313|EMBL:CBK97516.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CBK97516.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Cell Wall Hydrolase./Putative peptidoglycan binding domain n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RL48_9FIRM
L1_008_000M1_scaffold_120_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1353..2210)
DNA (858bp) protein (286aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWP8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97517.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_120_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2225..3181)
DNA (957bp) protein (319aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWP9_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBK97518.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_120_4
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3202..3951)
DNA (750bp) protein (250aa)
Acyl-ACP thioesterase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RPK7_9FIRM
Acyl-ACP thioesterase {ECO:0000313|EMBL:CDC49590.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Acyl-ACP thioesterase
L1_008_000M1_scaffold_120_5
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3981..5276)
DNA (1296bp) protein (432aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000313|EMBL:EDR99805.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EDR99805.1};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Seryl-tRNA synthetase n=5 Tax=root RepID=D4JWQ1_9FIRM
L1_008_000M1_scaffold_120_6
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5299..6144)
DNA (846bp) protein (282aa)
Chromosome segregation DNA-binding protein n=2 Tax=root RepID=D4JWQ2_9FIRM
chromosome segregation DNA-binding protein
Chromosome segregation DNA-binding protein {ECO:0000313|EMBL:CDC49588.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L1_008_000M1_scaffold_120_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6154..6924)
DNA (771bp) protein (257aa)
Chromosome segregation ATPase n=2 Tax=root RepID=D4JWQ3_9FIRM
chromosome segregation ATPase
Chromosome segregation ATPase {ECO:0000313|EMBL:CBK97522.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_120_8

Not on your lists

comp(7054..7848)
DNA (795bp) protein (265aa)
ParB-like partition protein n=1 Tax=human gut metagenome RepID=K1U166_9ZZZZ
ParB-like partition protein {ECO:0000313|EMBL:EKC73644.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ParB-like partition proteins
L1_008_000M1_scaffold_120_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7955..8653)
DNA (699bp) protein (233aa)
16S rRNA methyltransferase GidB (EC:2.1.-.-)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWQ5_9FIRM
L1_008_000M1_scaffold_120_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8640..10517)
DNA (1878bp) protein (626aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWQ6_9FIRM
glucose-inhibited division protein A
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_120_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10615..13251)
DNA (2637bp) protein (879aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000313|EMBL:CBK97526.1}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000313|EMBL:CBK97526.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWQ7_9FIRM
L1_008_000M1_scaffold_120_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13283..13951)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWQ8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97527.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_120_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13900..14346)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWQ9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97528.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_120_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14382..16460)
DNA (2079bp) protein (693aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWR0_9FIRM
L1_008_000M1_scaffold_120_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16765..17022)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=root RepID=K1TGZ0_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL35434.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L1_008_000M1_scaffold_120_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17028..18161)
DNA (1134bp) protein (378aa)
DNA replication and repair protein RecF n=2 Tax=root RepID=D4JWR2_9FIRM
recF protein
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_120_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18179..18394)
DNA (216bp) protein (72aa)
Uncharacterized conserved protein n=4 Tax=Eubacterium RepID=D4JWR3_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK97532.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_120_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18396..18956)
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWR4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97533.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_120_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18959..19306)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MNU7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL35430.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L1_008_000M1_scaffold_120_20
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19308..20405)
DNA (1098bp) protein (366aa)
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
DNA polymerase III subunit beta n=2 Tax=Eubacterium RepID=D4JWR6_9FIRM
L1_008_000M1_scaffold_120_21
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20893..22293)
DNA (1401bp) protein (467aa)
Chromosomal replication initiator protein DnaA n=5 Tax=root RepID=B0MRG6_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
chromosomal replication initiator protein DnaA
L1_008_000M1_scaffold_120_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23427..25229)
DNA (1803bp) protein (601aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=2 Tax=Eubacterium RepID=B0MRG7_9FIRM
L1_008_000M1_scaffold_120_23
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25357..25623)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Eubacterium siraeum RepID=UPI0003042892
Uncharacterized protein {ECO:0000313|EMBL:CDC43461.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L1_008_000M1_scaffold_120_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26413..27126
DNA (714bp) protein (238aa)
VTC domain n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JWR9_9FIRM
VTC domain.
VTC domain {ECO:0000313|EMBL:CBK97538.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_120_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27164..27871
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR99826.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L1_008_000M1_scaffold_120_26
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28280..28591
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:253 PF5_9CLOT">RepID=R6LPF5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB89343.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
hypothetical protein
L1_008_000M1_scaffold_120_27
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28594..28821
DNA (228bp) protein (76aa)
YgiT-type zinc finger domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4I0_9CLOT
YgiT-type zinc finger domain protein {ECO:0000313|EMBL:EEG72973.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
DapA; dihydrodipicolinate synthase/N-acetylneuraminate lyase
L1_008_000M1_scaffold_120_28
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29188..30216
DNA (1029bp) protein (343aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRH2_9FIRM
L1_008_000M1_scaffold_120_29
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30621..31835
DNA (1215bp) protein (405aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=2 Tax=Eubacterium RepID=B0MRH4_9FIRM
L1_008_000M1_scaffold_120_30
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31837..32370
DNA (534bp) protein (178aa)
Acetyltransferases n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MNT7_9FIRM
Acetyltransferases
Acetyltransferases {ECO:0000313|EMBL:CBL35420.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Displaying items 1-30 of 100 in total

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