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L1_008_000M1_scaffold_125

Search features with annotation key words

Displaying items 1-30 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_125_1
Fusobacterium sp. CM21, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(1..297)
DNA (297bp) protein (99aa)
Transposase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF46_CLOSV
Transposase {ECO:0000313|EMBL:ETT07437.1}; TaxID=936562 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium sp. CM21.;"
Transposase and inactivated derivatives
L1_008_000M1_scaffold_125_2
unknown

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561..1079
DNA (519bp) protein (173aa)

This feature has no annotations

L1_008_000M1_scaffold_125_3
unknown

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1099..1626
DNA (528bp) protein (176aa)

This feature has no annotations

L1_008_000M1_scaffold_125_4
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1617..2030
DNA (414bp) protein (138aa)
PF13780 domain protein n=2 Tax=Clostridiales RepID=R6QMB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK52370.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L1_008_000M1_scaffold_125_5
unknown

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2223..2489
DNA (267bp) protein (89aa)

This feature has no annotations

L1_008_000M1_scaffold_125_6
unknown

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2653..3015
DNA (363bp) protein (121aa)

This feature has no annotations

L1_008_000M1_scaffold_125_7
unknown

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3009..3173
DNA (165bp) protein (55aa)

This feature has no annotations

L1_008_000M1_scaffold_125_8
unknown

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3178..3693
DNA (516bp) protein (172aa)

This feature has no annotations

L1_008_000M1_scaffold_125_9
Listeria floridensis, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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3722..4579
DNA (858bp) protein (286aa)
Uncharacterized protein (Fragment) n=3 Tax=Streptococcus mutans RepID=M2ILB7_STRMG
Uncharacterized protein {ECO:0000313|EMBL:EUJ26954.1}; TaxID=1265817 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria floridensis FSL S10-1187.;"
L1_008_000M1_scaffold_125_10
unknown

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4590..5108
DNA (519bp) protein (173aa)

This feature has no annotations

L1_008_000M1_scaffold_125_11
unknown

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5157..5717
DNA (561bp) protein (187aa)

This feature has no annotations

L1_008_000M1_scaffold_125_12
unknown

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5714..6799
DNA (1086bp) protein (362aa)

This feature has no annotations

L1_008_000M1_scaffold_125_13
unknown

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6806..7453
DNA (648bp) protein (216aa)

This feature has no annotations

L1_008_000M1_scaffold_125_14
unknown

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7499..8416
DNA (918bp) protein (306aa)

This feature has no annotations

L1_008_000M1_scaffold_125_15
unknown

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8431..9063
DNA (633bp) protein (211aa)

This feature has no annotations

L1_008_000M1_scaffold_125_16
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9108..9380
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GM21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13576.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_008_000M1_scaffold_125_17
unknown

Not on your lists

9420..10019
DNA (600bp) protein (200aa)

This feature has no annotations

L1_008_000M1_scaffold_125_18
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10086..10445
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SXN5_ROSHA
hypothetical protein
UPF0122 protein RHOM_09805 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_125_19
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10447..11796
DNA (1350bp) protein (450aa)
Signal recognition particle protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QY89_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
hypothetical protein
L1_008_000M1_scaffold_125_20
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


11835..12080
DNA (246bp) protein (82aa)
30S ribosomal protein S16 n=2 Tax=Roseburia RepID=C0FMU7_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
SSU ribosomal protein S16P
L1_008_000M1_scaffold_125_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12098..12328
DNA (231bp) protein (77aa)
UPF0109 protein EUBREC_1507 n=4 Tax=Eubacterium RepID=C4Z930_EUBR3
RNA-binding protein (KH domain)
UPF0109 protein EUBREC_1507 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_008_000M1_scaffold_125_22
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12408..12950
DNA (543bp) protein (181aa)
Ribosome maturation factor RimM n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SXN1_ROSHA
rimM; 16S rRNA-processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_125_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12962..13684
DNA (723bp) protein (241aa)
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
tRNA (guanine-N(1)-)-methyltransferase n=2 Tax=Roseburia intestinalis RepID=D4KZK1_9FIRM
L1_008_000M1_scaffold_125_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13841..14878
DNA (1038bp) protein (346aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVA2_9FIRM
heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_125_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14900..15526
DNA (627bp) protein (209aa)
Protein GrpE n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3Z0_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Molecular chaperone GrpE (heat shock protein)
L1_008_000M1_scaffold_125_26
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15569..17449
DNA (1881bp) protein (627aa)
Chaperone protein DnaK n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IPY2_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
chaperone protein DnaK
L1_008_000M1_scaffold_125_27
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17554..18744
DNA (1191bp) protein (397aa)
Chaperone protein DnaJ n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IPN5_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
chaperone protein DnaJ
L1_008_000M1_scaffold_125_28
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18931..19380
DNA (450bp) protein (150aa)
Putative DnaJ domain protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6PVE6_9FIRM
Putative DnaJ domain protein {ECO:0000313|EMBL:CDC13737.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
DnaJ domain.
L1_008_000M1_scaffold_125_29
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19734..20687
DNA (954bp) protein (318aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Roseburia sp. CAG:182 RepID=R7R0X8_9FIRM
L1_008_000M1_scaffold_125_30
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20725..21471
DNA (747bp) protein (249aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PRD7_9FIRM
hypothetical protein
Displaying items 1-30 of 126 in total

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