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L1_008_000M1_scaffold_162

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_162_1
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(132..1475)
DNA (1344bp) protein (448aa)
MATE efflux family protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0ISE1_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EOT23499.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
multidrug resistance protein, MATE family
L1_008_000M1_scaffold_162_2
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1522..2451)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FYC7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCY05737.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
hypothetical protein
L1_008_000M1_scaffold_162_3
unknown

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comp(2448..2678)
DNA (231bp) protein (77aa)

This feature has no annotations

L1_008_000M1_scaffold_162_4
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3193..3909
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9K6T1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS42058.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
L1_008_000M1_scaffold_162_5
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3906..4547)
DNA (642bp) protein (214aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFW1_9CLOT
L1_008_000M1_scaffold_162_6
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4609..6198)
DNA (1590bp) protein (530aa)
NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KNR0_9FIRM
NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain {ECO:0000313|EMBL:CCY68383.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain
L1_008_000M1_scaffold_162_7
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6462..7457)
DNA (996bp) protein (332aa)
Dihydroxyacetone kinase, DhaK subunit n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9J031_9FIRM
Dihydroxyacetone kinase, DhaK subunit {ECO:0000313|EMBL:EOS24547.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
dhaK; dihydroxyacetone kinase subunit DhaK
L1_008_000M1_scaffold_162_8
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7628..9319)
DNA (1692bp) protein (564aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
ptsI; putative phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Eubacterium sp. 14-2 RepID=S0J4D2_9FIRM
L1_008_000M1_scaffold_162_9
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9331..9597)
DNA (267bp) protein (89aa)
HPr family phosphocarrier n=1 Tax=Eubacterium sp. 14-2 RepID=S0J901_9FIRM
HPr family phosphocarrier {ECO:0000313|EMBL:EOT23481.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
phosphotransferase system, phosphocarrier protein HPr
L1_008_000M1_scaffold_162_10
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9631..10020)
DNA (390bp) protein (130aa)
Dihydroxyacetone kinase, phosphotransfer subunit n=1 Tax=Eubacterium sp. 14-2 RepID=S0IU58_9FIRM
Dihydroxyacetone kinase, phosphotransfer subunit {ECO:0000313|EMBL:EOT23482.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
dihydroxyacetone kinase, phosphotransfer subunit
L1_008_000M1_scaffold_162_11
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10044..10670)
DNA (627bp) protein (209aa)
Dihydroxyacetone kinase, L subunit n=2 Tax=Eubacterium sp. 14-2 RepID=S0J6Y9_9FIRM
Dihydroxyacetone kinase, L subunit {ECO:0000313|EMBL:EOT23483.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
dhaL; dihydroxyacetone kinase, l subunit
L1_008_000M1_scaffold_162_12
unknown

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10778..10975
DNA (198bp) protein (66aa)

This feature has no annotations

L1_008_000M1_scaffold_162_13
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11558..13663)
DNA (2106bp) protein (702aa)
PAS domain S-box protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0ISD0_9FIRM
PAS domain S-box protein {ECO:0000313|EMBL:EOT23484.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
putative sigma54 specific transcriptional regulator with PAS/PAC sensor
L1_008_000M1_scaffold_162_14
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13683..15023)
DNA (1341bp) protein (447aa)
RNA polymerase sigma-54 factor n=1 Tax=Eubacterium sp. 14-2 RepID=S0J4D8_9FIRM
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EOT23485.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
RNA polymerase sigma-54 subunit RpoN
L1_008_000M1_scaffold_162_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15064..17643)
DNA (2580bp) protein (860aa)
Small GTP-binding protein domain protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDW3_9FIRM
Small GTP-binding protein domain protein {ECO:0000313|EMBL:EGN37567.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
small GTP-binding protein domain
L1_008_000M1_scaffold_162_16
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17660..19564)
DNA (1905bp) protein (635aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BAM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83233.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
ABC transporter
L1_008_000M1_scaffold_162_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19554..21299)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5K4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44187.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ABC transporter
L1_008_000M1_scaffold_162_18
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21409..22551)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RLS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ39619.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L1_008_000M1_scaffold_162_19
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22821..24791
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A977_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ22660.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
putative sensory transducer protein
L1_008_000M1_scaffold_162_20
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24810..25256
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2AE25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ22659.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
major membrane immunogen
L1_008_000M1_scaffold_162_21
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25440..26228)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IRE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS24470.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Predicted hydrolases of the HAD superfamily
L1_008_000M1_scaffold_162_22
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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comp(26232..28892)
DNA (2661bp) protein (887aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V749_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92905.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
plasma-membrane calcium-translocating P-type ATPase
L1_008_000M1_scaffold_162_23
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28993..29580)
DNA (588bp) protein (196aa)
Uncharacterized proteins involved in stress response homologs of TerZ and putative cAMP-binding protein CABP1 n=1 Tax=Roseburia sp. CAG:303 RepID=R7IP71_9FIRM
Uncharacterized proteins involved in stress response homologs of TerZ and putative cAMP-binding protein CABP1 {ECO:0000313|EMBL:CDE53108.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
L1_008_000M1_scaffold_162_24
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29591..30172)
DNA (582bp) protein (194aa)
Bacterial stress protein n=4 Tax=Roseburia RepID=C7G892_9FIRM
Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Tellurium resistance protein TerD {ECO:0000313|EMBL:EOS31921.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L1_008_000M1_scaffold_162_25
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30197..31342)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IRE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS24475.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Uncharacterized protein involved in tellurite resistance
L1_008_000M1_scaffold_162_26
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31345..33618)
DNA (2274bp) protein (758aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YBW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24385.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000M1_scaffold_162_27
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33748..34728
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IZZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS24512.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Citrate lyase beta subunit
L1_008_000M1_scaffold_162_28
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

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34770..35621
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VS61_9CLOT
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03938.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
Transcriptional regulator, TRAP family
L1_008_000M1_scaffold_162_29
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(35740..38127)
DNA (2388bp) protein (796aa)
Glycoside Hydrolase Family 13 candidate a-glycosidase (Amylase-related) n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DXX1_9FIRM
Glycoside Hydrolase Family 13 candidate a-glycosidase (Amylase-related) {ECO:0000313|EMBL:CCX81457.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
Glycoside Hydrolase Family 13 candidate a-glycosidase (amylase-related)
L1_008_000M1_scaffold_162_30
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(38124..38741)
DNA (618bp) protein (206aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PVN5_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCZ20303.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
Transcriptional regulator
Displaying items 1-30 of 83 in total

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