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L1_008_000M1_scaffold_193

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_193_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(120..1673)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C6J944_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEV00700.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_008_000M1_scaffold_193_2
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1980..2453)
DNA (474bp) protein (158aa)
Hydrogenase nickel insertion protein HypA n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K2M3_9FIRM
Hydrogenase nickel insertion protein HypA {ECO:0000313|EMBL:EOS40476.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)
L1_008_000M1_scaffold_193_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2484..5363)
DNA (2880bp) protein (960aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7P9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24543.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
L1_008_000M1_scaffold_193_4
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5447..6187)
DNA (741bp) protein (247aa)
CO dehydrogenase/acetyl-CoA synthase beta subunit n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4J1C9_BUTFI
CO dehydrogenase/acetyl-CoA synthase beta subunit
CO dehydrogenase/acetyl-CoA synthase beta subunit {ECO:0000313|EMBL:CBK73918.1}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
L1_008_000M1_scaffold_193_5
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6184..6351)
DNA (168bp) protein (56aa)
Putative uncharacterized protein n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4J1C8_BUTFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK73917.1}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
L1_008_000M1_scaffold_193_6
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6353..7159)
DNA (807bp) protein (269aa)
CoA-substrate-specific enzyme activase, putative n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4J1C7_BUTFI
CoA-substrate-specific enzyme activase, putative
CoA-substrate-specific enzyme activase, putative {ECO:0000313|EMBL:CBK73916.1}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
L1_008_000M1_scaffold_193_7
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(7175..8737)
DNA (1563bp) protein (521aa)
Uncharacterized protein n=2 Tax=root RepID=R5AYX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45947.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_193_8
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(8737..9933)
DNA (1197bp) protein (399aa)
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B3C1_9FIRM
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB {ECO:0000313|EMBL:CCX45946.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
L1_008_000M1_scaffold_193_9
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9946..10725)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K223_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40484.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
CO dehydrogenase maturation factor
L1_008_000M1_scaffold_193_10
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10947..12344)
DNA (1398bp) protein (466aa)
Putative lipoprotein n=1 Tax=Roseburia sp. CAG:471 RepID=R7E7S6_9FIRM
Putative lipoprotein {ECO:0000313|EMBL:CDD98989.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
Polysaccharide deacetylase.
L1_008_000M1_scaffold_193_11
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12381..12800)
DNA (420bp) protein (140aa)
Spore coat protein JC n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IPN0_9FIRM
Spore coat protein JC {ECO:0000313|EMBL:EOS23771.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Mn-containing catalase
L1_008_000M1_scaffold_193_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12804..13067)
DNA (264bp) protein (88aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GBY4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA57763.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_193_13
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13067..13276)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QTN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF41902.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
hypothetical protein
L1_008_000M1_scaffold_193_14
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13367..14557)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6P042_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14004.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L1_008_000M1_scaffold_193_15
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14564..15409)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YER7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25365.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000M1_scaffold_193_16
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15422..16657)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6P698_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14006.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
L1_008_000M1_scaffold_193_17
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16669..20214)
DNA (3546bp) protein (1182aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QW43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF41898.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
hypothetical protein
L1_008_000M1_scaffold_193_18
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20341..21432
DNA (1092bp) protein (364aa)
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase n=2 Tax=Lachnospiraceae RepID=R5I3J3_9FIRM
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase {ECO:0000313|EMBL:CCY31361.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L1_008_000M1_scaffold_193_19
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21528..21890
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J647_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT24080.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_193_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21905..22600
DNA (696bp) protein (232aa)
ABC-type multidrug transport system, ATPase component n=3 Tax=Roseburia RepID=D4KWM7_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CDA56324.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_193_21
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22594..23406
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GIK3_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO35488.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_008_000M1_scaffold_193_22
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24051..25436)
DNA (1386bp) protein (462aa)
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.4.1.14 1.97.-.- 1.4.1.13)
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IWP3_9FIRM
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EOS26309.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L1_008_000M1_scaffold_193_23
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25436..26323)
DNA (888bp) protein (296aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.97.-.- 1.18.1.2)
Ferredoxin-NADP+ reductase n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K455_9FIRM
Ferredoxin-NADP+ reductase {ECO:0000313|EMBL:EOS41225.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L1_008_000M1_scaffold_193_24
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26453..27631)
DNA (1179bp) protein (393aa)
CoA-transferase family III protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C984_9FIRM
CoA-transferase family III protein {ECO:0000313|EMBL:EDS72248.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
hypothetical protein
L1_008_000M1_scaffold_193_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27657..28430)
DNA (774bp) protein (258aa)
ABC-type uncharacterized transport system, ATPase component n=3 Tax=Eubacterium rectale RepID=D4JGP6_9FIRM
ABC-type uncharacterized transport system, ATPase component
Putative ABC-transporter ATP-binding component {ECO:0000313|EMBL:ACR74023.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_008_000M1_scaffold_193_26
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28423..29307)
DNA (885bp) protein (295aa)
ABC transporter integral membrane protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YQW8_9FIRM
ABC transporter integral membrane protein {ECO:0000313|EMBL:CDA23836.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
ABC transporter permease
L1_008_000M1_scaffold_193_27
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29340..30383)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6T6A6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC68938.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
ABC-type uncharacterized transport system, periplasmic component
L1_008_000M1_scaffold_193_28
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30985..31239)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KT94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE78968.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L1_008_000M1_scaffold_193_29
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31265..32992)
DNA (1728bp) protein (576aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium sp. CAG:411 RepID=R7I9R7_9CLOT
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:CDE47242.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
Methyl-accepting chemotaxis protein
L1_008_000M1_scaffold_193_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33004..34185)
DNA (1182bp) protein (394aa)
Basic membrane lipoprotein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6P8_9FIRM
Basic membrane lipoprotein {ECO:0000313|EMBL:CCZ79131.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
basic membrane lipoprotein
Displaying items 1-30 of 72 in total

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