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L1_008_000M1_scaffold_232

Search features with annotation key words

Displaying items 31-60 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_232_31
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36558..36755
DNA (198bp) protein (66aa)
hydrolase, TatD family (EC:3.1.21.-)
Hydrolase TatD family n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0F8_9FIRM
Hydrolase TatD family {ECO:0000313|EMBL:CDE20640.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_232_32
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36851..37726)
DNA (876bp) protein (292aa)
Putative transcriptional regulator LysR family n=1 Tax=Dorea longicatena CAG:42 RepID=R7G134_9FIRM
Putative transcriptional regulator LysR family {ECO:0000313|EMBL:CDE20641.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
LysR family transcriptional regulator
L1_008_000M1_scaffold_232_33
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37893..39356
DNA (1464bp) protein (488aa)
3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases (EC:4.1.1.-)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZI4_9FIRM
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000313|EMBL:CDE20644.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_232_34
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39358..39993
DNA (636bp) protein (212aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases (EC:4.1.1.-)
Polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G140_9FIRM
L1_008_000M1_scaffold_232_35
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40088..40465
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G3R0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20647.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_232_36
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40487..40735
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20648.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_232_37
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40819..41682)
DNA (864bp) protein (288aa)
Transcriptional regulator AraC family n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZJ2_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE20649.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
transcriptional regulator, AraC family
L1_008_000M1_scaffold_232_38
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41918..43201
DNA (1284bp) protein (428aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0G9_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDE20650.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_232_39
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43247..44125
DNA (879bp) protein (293aa)
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) n=1 Tax=Dorea longicatena CAG:42 RepID=R7G144_9FIRM
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDE20651.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_232_40
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44125..44967
DNA (843bp) protein (281aa)
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) n=1 Tax=Dorea longicatena CAG:42 RepID=R7G3R6_9FIRM
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDE20652.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_232_41
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45012..47198
DNA (2187bp) protein (729aa)
Alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1K2_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:CDE20653.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_232_42
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47365..47922
DNA (558bp) protein (186aa)
Glycosidases (EC:2.4.1.4 5.4.99.16)
Glycosidases {ECO:0000313|EMBL:CBL26996.1}; EC=2.4.1.4 {ECO:0000313|EMBL:CBL26996.1};; EC=5.4.99.16 {ECO:0000313|EMBL:CBL26996.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Glycosidases n=1 Tax=Ruminococcus torques L2-14 RepID=D4LYY6_9FIRM
L1_008_000M1_scaffold_232_43
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47891..48439
DNA (549bp) protein (183aa)
Glycosidases (EC:2.4.1.4 5.4.99.16)
Glycosidases n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0H4_9FIRM
Glycosidases {ECO:0000313|EMBL:CDE20655.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_232_44
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


48616..49494
DNA (879bp) protein (293aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Dorea RepID=A6BI88_9FIRM
L1_008_000M1_scaffold_232_45
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49500..50870
DNA (1371bp) protein (457aa)
Citrate synthase (EC:2.3.3.5 2.3.3.1)
Citrate synthase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G3S1_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_232_46
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50867..51799
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20658.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Lysophospholipase
L1_008_000M1_scaffold_232_47
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52583..52912
DNA (330bp) protein (110aa)
Cupin domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI83_9FIRM
Cupin domain protein {ECO:0000313|EMBL:EDM62618.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Uncharacterized conserved protein, contains double-stranded beta-helix domain
L1_008_000M1_scaffold_232_48
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53199..53558)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N985_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79531.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Sporulation initiation factor Spo0A C terminal.
L1_008_000M1_scaffold_232_49
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53845..54540
DNA (696bp) protein (232aa)
Response regulator receiver domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI80_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDM62615.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_000M1_scaffold_232_50
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54553..57159
DNA (2607bp) protein (869aa)
Histidine kinase A domain protein n=2 Tax=Dorea longicatena DSM 13814 RepID=A6BI79_9FIRM
Histidine kinase A domain protein {ECO:0000313|EMBL:EDM62614.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Signal transduction histidine kinase
L1_008_000M1_scaffold_232_51
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

57303..58514
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G155_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20661.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_232_52
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58515..60962
DNA (2448bp) protein (816aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62612.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_232_53
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61032..61520)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1L5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20663.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted membrane protein
L1_008_000M1_scaffold_232_54
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61756..62979)
DNA (1224bp) protein (408aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
6-phosphofructokinase (EC:2.7.1.11)
Phosphofructokinase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZL1_9FIRM
L1_008_000M1_scaffold_232_55
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63140..64531
DNA (1392bp) protein (464aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=2 Tax=Dorea RepID=A6BI74_9FIRM
L1_008_000M1_scaffold_232_56
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

64636..65325
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI73_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDM62608.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L1_008_000M1_scaffold_232_57
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65315..66538
DNA (1224bp) protein (408aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Dorea RepID=R7G3T2_9FIRM
histidine kinase
L1_008_000M1_scaffold_232_58
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

66489..67520
DNA (1032bp) protein (344aa)
DNA double-strand break repair protein Mre11 n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI70_9FIRM
DNA double-strand break repair protein Mre11 {ECO:0000313|EMBL:EDM62605.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
DNA repair exonuclease
L1_008_000M1_scaffold_232_59
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

67530..69098
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20669.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_232_60
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(69185..70372)
DNA (1188bp) protein (396aa)
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:EDM62603.1}; EC=2.7.6.1 {ECO:0000313|EMBL:EDM62603.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI68_9FIRM
Displaying items 31-60 of 96 in total

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