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L1_008_000M1_scaffold_232

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Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_232_1
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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1210..3777
DNA (2568bp) protein (856aa)
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8)
Putative calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB9_9FIRM
Putative calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EDM62654.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_232_2
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3768..4925
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20605.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted permease
L1_008_000M1_scaffold_232_3
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4975..5595)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0Z7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20606.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
nucleoside recognition domain containing protein
L1_008_000M1_scaffold_232_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5781..6308
DNA (528bp) protein (176aa)
Transporter gate domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G3L5_9FIRM
Transporter gate domain protein {ECO:0000313|EMBL:CDE20607.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Uncharacterized membrane protein
L1_008_000M1_scaffold_232_5
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6345..7082)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1E6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20608.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_232_6
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7268..8632
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20609.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_232_7
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8720..9364
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BIB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20610.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_232_8
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9315..12659
DNA (3345bp) protein (1115aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G102_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20611.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
SMC domain-containing protein
L1_008_000M1_scaffold_232_9
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12946..13803)
DNA (858bp) protein (286aa)
Transcriptional regulator, AraC family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB0_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDM62645.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
xylan 1,4-beta-xylosidase
L1_008_000M1_scaffold_232_10
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13958..14155
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62644.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_232_11
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14640..14744
DNA (105bp) protein (35aa)
Cyclic nucleotide-binding domain protein n=2 Tax=Dorea RepID=A6BIA8_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:CDE20615.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_232_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14757..15161
DNA (405bp) protein (135aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G106_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:CDE20616.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
CarD family transcriptional regulator
L1_008_000M1_scaffold_232_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15690..17045
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G3M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20617.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted ATPase (AAA+ superfamily)
L1_008_000M1_scaffold_232_14
unknown

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17489..17587
DNA (99bp) protein (33aa)

This feature has no annotations

L1_008_000M1_scaffold_232_15
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17584..18384
DNA (801bp) protein (267aa)
Metallo-beta-lactamase domain protein n=2 Tax=Dorea RepID=A6BIA3_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDM62638.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Metal-dependent hydrolases of the beta-lactamase superfamily III
L1_008_000M1_scaffold_232_16
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18506..19465)
DNA (960bp) protein (320aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R7FZF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20619.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_232_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19763..20296
DNA (534bp) protein (178aa)
Cupin domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0D5_9FIRM
Cupin domain protein {ECO:0000313|EMBL:CDE20620.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
XRE family transcriptional regulator
L1_008_000M1_scaffold_232_18
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20388..21965
DNA (1578bp) protein (526aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00035095}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00035095};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Polyamine ABC transporter, ATP-binding protein n=2 Tax=Dorea RepID=A6BI99_9FIRM
potA; spermidine/putrescine ABC transporter ATP-binding protein
L1_008_000M1_scaffold_232_19
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21967..22803
DNA (837bp) protein (279aa)
ABC transporter, permease protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI98_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDM62633.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ABC-type spermidine/putrescine transport system, permease component I
L1_008_000M1_scaffold_232_20
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22809..24701
DNA (1893bp) protein (631aa)
ABC transporter, permease protein n=2 Tax=root RepID=A6BI97_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDM62632.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ABC-type spermidine/putrescine transport system, permease component II
L1_008_000M1_scaffold_232_21
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24718..26526)
DNA (1809bp) protein (603aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62631.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_232_22
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26609..26920)
DNA (312bp) protein (104aa)
Branched-chain amino acid transport protein (AzlD) n=2 Tax=Dorea RepID=A6BI95_9FIRM
Branched-chain amino acid transport protein (AzlD) {ECO:0000313|EMBL:CDE20626.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Branched-chain amino acid transport protein AzlD
L1_008_000M1_scaffold_232_23
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26910..27677)
DNA (768bp) protein (256aa)
AzlC protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G3N7_9FIRM
AzlC protein {ECO:0000313|EMBL:CDE20627.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
branched-chain amino acid permease (azaleucine resistance)
L1_008_000M1_scaffold_232_24
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27969..28994
DNA (1026bp) protein (342aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ABC-type metal ion transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NVA9_9FIRM
ABC-type metal ion transport system, ATPase component
L1_008_000M1_scaffold_232_25
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28994..29662
DNA (669bp) protein (223aa)
ABC-type metal ion transport system, permease component n=1 Tax=Ruminococcus torques L2-14 RepID=D4M391_9FIRM
ABC-type metal ion transport system, permease component
ABC-type metal ion transport system, permease component {ECO:0000313|EMBL:CBL25703.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_232_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29793..30647
DNA (855bp) protein (285aa)
ABC-type metal ion transport system, periplasmic component/surface antigen n=1 Tax=Ruminococcus torques L2-14 RepID=D4M390_9FIRM
ABC-type metal ion transport system, periplasmic component/surface antigen
ABC-type metal ion transport system, periplasmic component/surface antigen {ECO:0000313|EMBL:CBL25702.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_232_27
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30687..32003
DNA (1317bp) protein (439aa)
Amidohydrolase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M389_9FIRM
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:CBL25701.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_232_28
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32274..33263
DNA (990bp) protein (330aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI93_9FIRM
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EDM62628.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L1_008_000M1_scaffold_232_29
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


33777..35717
DNA (1941bp) protein (647aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZH8_9FIRM
L1_008_000M1_scaffold_232_30
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36059..36592
DNA (534bp) protein (178aa)
hydrolase, TatD family (EC:3.1.21.-)
Hydrolase TatD family n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0F8_9FIRM
Hydrolase TatD family {ECO:0000313|EMBL:CDE20640.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Displaying items 1-30 of 96 in total

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