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L1_008_000M1_scaffold_232

Search features with annotation key words

Displaying items 61-90 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_232_61
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(70356..71369)
DNA (1014bp) protein (338aa)
Putative DNA replication protein DnaC n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI67_9FIRM
Putative DNA replication protein DnaC {ECO:0000313|EMBL:EDM62602.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
DNA replication protein DnaC
L1_008_000M1_scaffold_232_62
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(71420..72538)
DNA (1119bp) protein (373aa)
DnaD domain protein n=2 Tax=Dorea RepID=A6BI66_9FIRM
DnaD domain protein {ECO:0000313|EMBL:CDE20672.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
DnaD and phage-associated domain
L1_008_000M1_scaffold_232_63
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(72684..74063)
DNA (1380bp) protein (460aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1M8_9FIRM
L1_008_000M1_scaffold_232_64
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

74289..75563
DNA (1275bp) protein (425aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI64_9FIRM
L1_008_000M1_scaffold_232_65
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

75560..76678
DNA (1119bp) protein (373aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|SAAS:SAAS00083544}; EC=2.7.7.27 {ECO:0000256|SAAS:SAAS00083544};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ADP-glucose pyrophosphorylase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=2 Tax=Dorea RepID=A6BI63_9FIRM
L1_008_000M1_scaffold_232_66
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

76721..76996
DNA (276bp) protein (92aa)
Putative septation protein SpoVG n=2 Tax=Dorea RepID=A6BI62_9FIRM
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Uncharacterized protein, involved in the regulation of septum location
L1_008_000M1_scaffold_232_67
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(77062..77841)
DNA (780bp) protein (260aa)
RNA pseudouridine synthase {ECO:0000313|EMBL:EDM62596.1}; EC=5.4.99.- {ECO:0000313|EMBL:EDM62596.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI61_9FIRM
L1_008_000M1_scaffold_232_68
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


78349..79788
DNA (1440bp) protein (480aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
prolyl-tRNA synthetase, family I (EC:6.1.1.15)
Proline--tRNA ligase n=2 Tax=Dorea RepID=A6BI59_9FIRM
L1_008_000M1_scaffold_232_69
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

79918..81261
DNA (1344bp) protein (448aa)
uncharacterized domain HDIG (EC:2.7.7.72 3.1.4.- 3.1.3.-)
tRNA nucleotidyltransferase/poly(A) polymerase family protein n=2 Tax=Dorea RepID=R7FZN1_9FIRM
tRNA nucleotidyltransferase/poly(A) polymerase family protein {ECO:0000313|EMBL:CDE20679.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_232_70
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

81335..82321
DNA (987bp) protein (329aa)
Spore coat protein, CotS family n=2 Tax=Dorea RepID=A6BI57_9FIRM
Spore coat protein CotS family {ECO:0000313|EMBL:CDE20680.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
CotS family spore coat protein
L1_008_000M1_scaffold_232_71
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

82507..82782
DNA (276bp) protein (92aa)
DNA-binding protein HU n=2 Tax=Dorea RepID=A6BI56_9FIRM
DNA-binding protein HU {ECO:0000313|EMBL:EDM62591.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Bacterial nucleoid DNA-binding protein
L1_008_000M1_scaffold_232_72
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

82922..83161
DNA (240bp) protein (80aa)
S4 domain protein n=2 Tax=Dorea RepID=R7G3V0_9FIRM
S4 domain protein {ECO:0000313|EMBL:EDM62590.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
L1_008_000M1_scaffold_232_73
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

83281..83565
DNA (285bp) protein (95aa)
Sporulation protein YabP n=2 Tax=Dorea RepID=R7G1P1_9FIRM
Sporulation protein YabP {ECO:0000313|EMBL:CDE20683.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
sporulation protein YabP
L1_008_000M1_scaffold_232_74
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

83617..83967
DNA (351bp) protein (117aa)
Putative spore cortex biosynthesis protein YabQ n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZN7_9FIRM
Putative spore cortex biosynthesis protein YabQ {ECO:0000313|EMBL:CDE20684.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Spore cortex protein YabQ (Spore_YabQ).
L1_008_000M1_scaffold_232_75
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

84031..84354
DNA (324bp) protein (108aa)
Septum formation initiator n=2 Tax=Dorea RepID=A6BI51_9FIRM
Septum formation initiator {ECO:0000313|EMBL:EDM62586.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Septum formation initiator.
L1_008_000M1_scaffold_232_76
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

84455..85861
DNA (1407bp) protein (469aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Putative stage II sporulation protein E n=2 Tax=Dorea RepID=R7G184_9FIRM
Putative stage II sporulation protein E {ECO:0000313|EMBL:CDE20686.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_232_77
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

85983..87371
DNA (1389bp) protein (463aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G3V5_9FIRM
L1_008_000M1_scaffold_232_78
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

87340..87867
DNA (528bp) protein (176aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EDM62582.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EDM62582.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI47_9FIRM
L1_008_000M1_scaffold_232_79
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

87896..89740
DNA (1845bp) protein (615aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0L8_9FIRM
ATP-dependent metalloprotease FtsH
L1_008_000M1_scaffold_232_80
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

89792..91861
DNA (2070bp) protein (690aa)
Glycosidases (EC:3.2.1.20)
Alpha amylase, catalytic domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI45_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EDM62580.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_232_81
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(92038..92847)
DNA (810bp) protein (270aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=2 Tax=Dorea RepID=R7G0N2_9FIRM
L1_008_000M1_scaffold_232_82
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

93076..94152
DNA (1077bp) protein (359aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=2 Tax=Dorea RepID=R7G3X2_9FIRM
6-phosphofructokinase 1 {ECO:0000313|EMBL:CDE20702.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_232_83
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

94200..95771
DNA (1572bp) protein (524aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EDM62576.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EDM62576.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=2 Tax=Dorea RepID=A6BI41_9FIRM
L1_008_000M1_scaffold_232_84
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

95784..96137
DNA (354bp) protein (118aa)
Nucleoid-associated protein DORLON_01969 n=2 Tax=Dorea RepID=A6BI40_9FIRM
Nucleoid-associated protein DORLON_01969 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
conserved hypothetical protein TIGR00103
L1_008_000M1_scaffold_232_85
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

96193..96789
DNA (597bp) protein (199aa)
Recombination protein RecR n=2 Tax=Dorea RepID=A6BI39_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
recombination protein RecR
L1_008_000M1_scaffold_232_86
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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96905..98005
DNA (1101bp) protein (367aa)
Sugar-binding domain protein n=2 Tax=Dorea RepID=A6BI38_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:EDM62573.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
transcriptional regulator
L1_008_000M1_scaffold_232_87
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

98311..98964
DNA (654bp) protein (218aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
transaldolase, putative, TalC family (EC:2.2.1.2)
Probable transaldolase n=2 Tax=Dorea RepID=A6BI37_9FIRM
L1_008_000M1_scaffold_232_88
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

99007..99843
DNA (837bp) protein (279aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Transketolase, thiamine diphosphate binding domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI36_9FIRM
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:EDM62571.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_232_89
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

99831..100772
DNA (942bp) protein (314aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Transketolase, pyridine binding domain protein n=2 Tax=Dorea RepID=A6BI35_9FIRM
Transketolase, pyridine binding domain protein {ECO:0000313|EMBL:EDM62570.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_232_90
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

101112..102017
DNA (906bp) protein (302aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
fructose-1-phosphate kinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI33_9FIRM
Displaying items 61-90 of 96 in total

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