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L1_008_000M1_scaffold_248

Search features with annotation key words

Displaying items 211-238 of 238 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_248_211
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(250515..250769)
DNA (255bp) protein (85aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=R6GS72_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI43903.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L1_008_000M1_scaffold_248_212
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(250766..254383)
DNA (3618bp) protein (1206aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMJ8_BIFBS
DNA and RNA helicase related protein {ECO:0000313|EMBL:KFI43904.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L1_008_000M1_scaffold_248_213
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(254392..256047)
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M2H8_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF16201.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
L1_008_000M1_scaffold_248_214
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(256212..256340)
DNA (129bp) protein (43aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6GI67_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53739.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_248_215
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(256340..256723)
DNA (384bp) protein (128aa)
50S ribosomal protein L7/L12 n=6 Tax=Bifidobacterium RepID=E3EMK1_BIFBS
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_248_216
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(256823..257344)
DNA (522bp) protein (174aa)
50S ribosomal protein L10 n=7 Tax=Bifidobacterium RepID=E4NZ94_BIFBP
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_248_217
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(257552..258556)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6GF90_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB24093.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L1_008_000M1_scaffold_248_218
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(258911..264091)
DNA (5181bp) protein (1727aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMK4_BIFBS
Uncharacterized protein {ECO:0000313|EMBL:ADO53743.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
hypothetical protein
L1_008_000M1_scaffold_248_219
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(264692..266086)
DNA (1395bp) protein (465aa)
Guanine-hypoxanthine permease n=7 Tax=Bifidobacterium RepID=E3EMK6_BIFBS
xanthine/uracil permease family protein
Putative permease {ECO:0000313|EMBL:ERI82513.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ98794.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L1_008_000M1_scaffold_248_220
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

266195..267214
DNA (1020bp) protein (340aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=I3WJV6_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50956.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L1_008_000M1_scaffold_248_221
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(267508..268287)
DNA (780bp) protein (260aa)
stB; phosphate ABC transporter ATP-binding protein (EC:3.6.3.27)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Beta-glucosides-specific IIA component n=8 Tax=Bifidobacterium RepID=E3EMK9_BIFBS
L1_008_000M1_scaffold_248_222
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(268327..269373)
DNA (1047bp) protein (349aa)
Phosphate ABC transporter, permease protein n=5 Tax=Bifidobacterium bifidum RepID=I3WJV8_BIFBI
pstA; phosphate ABC transporter permease
Phosphate ABC transporter permease {ECO:0000313|EMBL:EKF15730.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L1_008_000M1_scaffold_248_223
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(269370..270347)
DNA (978bp) protein (326aa)
Phosphate transport system permease protein n=8 Tax=Bifidobacterium RepID=E3EML1_BIFBS
pstC; phosphate ABC transporter permease
Phosphate ABC transporter permease {ECO:0000313|EMBL:EKF15731.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L1_008_000M1_scaffold_248_224
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(270476..271606)
DNA (1131bp) protein (377aa)
pstS; phosphate-binding protein PstS (EC:3.1.3.1)
Phosphate-binding protein PstS n=4 Tax=Bifidobacterium RepID=E4NZH8_BIFBP
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_248_225
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(271855..272559)
DNA (705bp) protein (235aa)
Two-component response regulator regX n=2 Tax=Bifidobacterium RepID=K2MUP0_BIFBI
Two-component response regulator regX {ECO:0000313|EMBL:CDB24161.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
response regulator of two-component system
L1_008_000M1_scaffold_248_226
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(272712..274067)
DNA (1356bp) protein (452aa)
phoR; phosphate regulon sensor protein PhoR (EC:2.7.13.3)
Phosphate regulon sensor protein PhoR n=3 Tax=Bifidobacterium bifidum RepID=E4NZI0_BIFBP
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:ERI82506.1}; Two-component sensor kinase {ECO:0000313|EMBL:BAQ98801.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L1_008_000M1_scaffold_248_227
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(274256..274963)
DNA (708bp) protein (236aa)
mtnN; MTA/SAH nucleosidase (EC:3.2.2.9)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
MTA/SAH nucleosidase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WJW3_BIFBI
L1_008_000M1_scaffold_248_228
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(275011..276249)
DNA (1239bp) protein (413aa)
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
AroG1 3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZI2_BIFBP
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:ADO53755.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_248_229
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

276891..277496
DNA (606bp) protein (202aa)
Transcriptional regulator n=2 Tax=Bifidobacterium bifidum IPR5_BIFBI">RepID=K2IPR5_BIFBI
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EKE50745.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L1_008_000M1_scaffold_248_230
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

277618..279000
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WJW6_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL05179.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_248_231
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(279143..280273)
DNA (1131bp) protein (377aa)
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WJW7_BIFBI
L1_008_000M1_scaffold_248_232
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(280484..281518)
DNA (1035bp) protein (345aa)
Excalibur domain protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CD81_BIFBI
Putative secreted protein {ECO:0000313|EMBL:KFI43924.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L1_008_000M1_scaffold_248_233
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(281733..283088)
DNA (1356bp) protein (452aa)
aminopeptidase (EC:3.4.22.40)
Putative aminopeptidase E n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CEP5_BIFBI
Aminopeptidase {ECO:0000313|EMBL:BAQ98809.1}; Putative aminopeptidase E {ECO:0000313|EMBL:ERI82498.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L1_008_000M1_scaffold_248_234
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(283324..284790)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VBH7_BIFBI
Large Ala/Glu-rich protein {ECO:0000313|EMBL:EKE50750.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L1_008_000M1_scaffold_248_235
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(284939..285616)
DNA (678bp) protein (226aa)
pcp; pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
Pcp Pyrrolidone-carboxylate peptidase {ECO:0000313|EMBL:KFI43927.1}; EC=3.4.19.3 {ECO:0000313|EMBL:KFI43927.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Pyroglutamyl-peptidase I n=6 Tax=Bifidobacterium RepID=E3EMM4_BIFBS
L1_008_000M1_scaffold_248_236
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(285650..286450)
DNA (801bp) protein (267aa)
ispD; 2-C-methyl-D-erythritol 4-phosphatecytidylyl transferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=2 Tax=Bifidobacterium bifidum RepID=K2HWD7_BIFBI
L1_008_000M1_scaffold_248_237
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(286814..287824)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GLE7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB22051.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L1_008_000M1_scaffold_248_238
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(287873..289504)
DNA (1632bp) protein (544aa)
Peptidase, U32 family {ECO:0000313|EMBL:EFR50937.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFR50937.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Peptidase, U32 family n=5 Tax=Bifidobacterium RepID=E4VBH3_BIFBI
yegQ; putative protease
Displaying items 211-238 of 238 in total

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