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L1_008_000M1_scaffold_57_123

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(163617..167648)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase beta' chain RpoC (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 1343.0
  • Bit_score: 2661
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 1343.0
  • Bit_score: 2661
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=5 Tax=Bifidobacterium bifidum RepID=E3ELV2_BIFBS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 1343.0
  • Bit_score: 2661
  • Evalue 0.0

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Taxonomy

Bifidobacterium bifidum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 4032
GTGCTGGACGTCAACGCATTTGACAAACTGAGGATCGGCCTGGCCACCGCCGACGACATCCGCAATTGGAGCCACGGCGAGGTCAAGAAGCCGGAAACCATTAACTACCGTACCCTGAAGCCCGAGAAGGACGGTCTGTTCGGCGAGCAGATCTTCGGACCCACCCGCGACTGGGAGTGCGCCTGCGGCAAGTACAAGCGCGTGCGCTTCAAGGGCATCATCTGCGAACGGTGCGGCGTGGAGGTCACCAAGTCCCGCGTGCGCCGCGAGCGCATGGGCCACATCGAGCTGGCCGCCCCCGTCACCCACATCTGGTTCTTCAAGGGCGTGCCGAGCCGTCTCGGCTACCTGCTGGACATCGCTCCGAAGGACCTGGAGAAGGTCATCTACTTCGCGGCCTACATGGTCACGAGCGTGGATGAGGAGCAGCGCCACAACGACCTGCCCGACCTGCAGGACGAGTTCGATACCGAGATCGGCAACATGGCCAAGCGCCGTGACAACGAGATCGAGAACCGCGCCCGCAAGGTCGAGGAGGATCTCGCCCAGCTTGAGGCCGAAGGCGAGGGCAGGGGCCCCGCACGCACCAAGCTGCGCAACGGCGCCGAGCGCGACATGGCCGCCATCCGCCAGCGTTACGACGATCAGATCCAGCGTCTGAACGCCGTGTTCGACCGCTTCAAGAGCCTGAAGCCGGGCGACTTGGAAGGCGACGTGGACCTGTGGCGCGAGATGCAGGACCGCTACGGCGACTACTTCGAGGGTTGTATGGGTGCAGAAGCCATCCAGAAGCGCCTGCAGGACTTCGACCTGGAGGCCGCCTCCAAGCAGCTGCGCGAGGAGATCGACTCCGGCTCCGGCCAGCGCAAGGCCCGCGCCCTCAAGCGCCTGAAGGTCGTCAACGCCTTCCTGACCACCGGCAACAAGCCGGAGGCCATGGTGCTGACCGTCATCCCGGTCATCCCGCCGGACCTGCGCCCGATGGTGCAGCTCGACGGTGGCCGCTTCGCGACCTCCGATCTCAACGACCTCTATCGTCGCGTGATCAACCGCAACAACCGTCTGAAGCGCCTGATCGAGCTCAACGCGCCCGAGATCATGCTGAACAACGAGAAGCGCATGCTGCAGGAAGCCGTTGACTCCCTGTTCGACAACGGCCGCCGCGGCCGTCCCGTCACCGGCGCCTCGAACCGCCCGCTCAAGTCCCTTTCGGACATGCTCAAGGGCAAGCAGGGCCGCTTCCGTCAGAACCTGCTGGGTAAGCGAGTCGACTACTCCGGCCGTTCCGTGATCGTCGTCGGCCCGTCGCTGCGCATGCACCAGTGCGGTCTGCCGAAGCCGATGGCGCTGGAGCTGTTCAAGCCGTTCGTCATCAAACGTCTGGTCGACATGAACTTCGCGCAGAACATGAAGAGCGCCAAGCGTCTCGTCGACCGCGGCGACTCCGAGGTGTGGGGCGTACTCGAAGAGGTCATATCCGAGCATCCCGTGTTGCTCAACCGTGCGCCTACGCTGCACCGTCTGGGCATCCAGGCGTTCGAGCCGATCCTGGTCGAAGGCAAGGCCATCCACCTGCCGCCGCTCGCCTGCGCCGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCTGTCCACCTCCCGCTGAGCGCCGAGGCACAGGCCGAGGCCCGCTCGCTGATGCTCGCTTCCGACAACATCCTCAAGCCCGCCGACGGCCACGTCGTTTCCATGCCTAGCCAGGACATGATCCTCGGCCTGTACTACCTGACGACCGTCATGGACGGCGCCAAGGGTCAGGGCCGCGTGTTCTCCTCATACGCTGAGGCGCAGATGGCGCTCGACCTGCACGAGATCGACATGCAGGCCGAAGTGCTGATCCGCCTGCCGAAGGACTTCGTGCTGCCGACCGGCTGGGAGCCCCGCGAGATCACCGTCGTGGATCCGGAACCGGGCAGCCCCGACGTCGTCAAGGAAGAGCGCTTCCACGACGGCAGCGTGCTGTTCGCTACCTCCATGGGCCGCATCCTCTTCAACGAGACGCTGCCCGTCGACTACCCGTTCGTCAACGAGCAGGCCAAGAAGAAGAAGCTGGCCAAGATCGTCGACGACATCTCCACCCGGTACTCCACCGCCCAGGTGGCCGCCTCGCTGGATGCGCTCAAGGATCTCGGCTTCACCCGCGCACCTTGGTCCGGCGTGACCTTCGCGTTCTCCGACGTCGTCGAGCCGCCGGAGCGTAACGAGCTGGTCGCCCAGTCCGAGGAGGAAGTCGCCAAGATCAACGAGCAGTACGACCTCGGTTTCTACACCGAAGAGGACCGCCGCCAGGCGATCATCGACGTGTGGACCAAGTGCGGTGAGGAAGTCTCCAAGGCCATCGAGAAGAACTTCGACCCGAAGAACAACCTCTCGATCATCGTCGAGTCCGGTGCACGAGGCAACATGACCCAGATCAACCAGATTTCCGGCGTGCGTGGTCTGGTGAACAACCCGAAGGGCGAGATCATTCCGCGACCGGTCGAGTCGAACTACCGCCGCGGACTGTCCGTGCTGGAGTACTTCATCTCCGAGCACGGCGCTCGTAAGGGTCTGGCCGATACCGCACTGCGTACCGCAGAGTCTGGCTACCTGACCCGTCGTCTGGTGGACGTCTCGCAGGACGTGATTGTGCGCGAGGAGGACTGCGGCACCAAGCGCGGTCTGACCATGCGCGTCGCCGACCGCGACGAGAACGGCAACCTGACGCTCGTCAAGGCCGCCGACGGTGGCCCCTACTCCCGTCTGCTTGCGGCCGATGTCATCGACCCGGCCGACGGCACGACCGTGCTGTACAAGCGCGACGACGCCCTGTCGATGGACGTGCTCAACGACCTGGTCGCGCACGGCGTCGAAGAGGTGCAGGCGCGTTCCGTCCTGACCTGCGAGTCCAAGCGCGGCGTGTGCGCCAAGTGCTACGGCTGGTCGCTGGCCACCAACACGCTGGTGGACGTCGGCGAAGCCGTCGGCATCGTCGCTGCCCAGTCCATCGGCGAGCCTGGTACTCAGCTGACGCTGCGTTCCTTCCACTCCGGTGGTGTGGCCGCCGCGTCCGATATCACCCAGGGTCTTCCCCGTGTCACCGAGCTTTTCGAAGCCCGTACCCCGAAGGGTGAGGCGCCGATCGCCGAGTTCGCCGGCGTGGTCAAGGTGGAGAACACCGATCACGGCCGTCAGATCACGCTGACGCCGGACGACACGAGCGTCGAACCGATCGTCTACACCGACACCCGTCGCGCGCCGATGCTGGTCAAGAACGGCGATCACGTGGCCGCCGGCGACCAGCTGGTCGAAGGTTCCGTCGATCCGAAGAAGATCCTGCGCATCCTCGGCCCGCGTGCCGCCCAGGTCAACATCGTGAACGAAGTGCACACCGTGTACCGTTCCCAGGGTGTGGATATCCACGACAAGCACATCGAGGTCATCGTGCACCAGATGCTGCGCCGCGTCACCGTGATCGATTCCGGTGACACCCCGCTGCTGCCTGGCGAGCTCGTCGACCAGGCGCGCTTCAAGGCCGCCAACAAGGAGACCATCAAGAACGGTGGCAAGCCGGCCGCCGCTCGTCCGGAGCTCATGGGCATCACCAAGGCCTCGCTGGCAACTGACTCGTGGCTGTCCGCCGCCTCCTTCCAGGAGACGACGCGCGTGCTCACCGAAGCCGCCCTGAGCCAGAAGGTCGATGACCTCAAGGGCCTCAAGGAGAACGTCATCATCGGTAAGCTCATCCCGGCCGGTACTGGCCTCGCCCGCTACCAAAACGCCGTGGTGGAGCCCGACAAGGCCATCCGCGACACGATCTACCCGAACTTCGGGCTGGGCGCGGACATGGACGGCTCGCAGACCGACTTCTCCGATGCCGACCTGTCCGATGTGGACTTCTCCAACATCGACTTCGGTGACCTGAAGCTCGGCGACGACTTCAATCCTGACGATTTCATCGATGATCAGGGCGGGAACGACTTCGGCGCCGACTCCGGCAACGATCTCGTCTGA
PROTEIN sequence
Length: 1344
VLDVNAFDKLRIGLATADDIRNWSHGEVKKPETINYRTLKPEKDGLFGEQIFGPTRDWECACGKYKRVRFKGIICERCGVEVTKSRVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDIAPKDLEKVIYFAAYMVTSVDEEQRHNDLPDLQDEFDTEIGNMAKRRDNEIENRARKVEEDLAQLEAEGEGRGPARTKLRNGAERDMAAIRQRYDDQIQRLNAVFDRFKSLKPGDLEGDVDLWREMQDRYGDYFEGCMGAEAIQKRLQDFDLEAASKQLREEIDSGSGQRKARALKRLKVVNAFLTTGNKPEAMVLTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIELNAPEIMLNNEKRMLQEAVDSLFDNGRRGRPVTGASNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPSLRMHQCGLPKPMALELFKPFVIKRLVDMNFAQNMKSAKRLVDRGDSEVWGVLEEVISEHPVLLNRAPTLHRLGIQAFEPILVEGKAIHLPPLACAAFNADFDGDQMAVHLPLSAEAQAEARSLMLASDNILKPADGHVVSMPSQDMILGLYYLTTVMDGAKGQGRVFSSYAEAQMALDLHEIDMQAEVLIRLPKDFVLPTGWEPREITVVDPEPGSPDVVKEERFHDGSVLFATSMGRILFNETLPVDYPFVNEQAKKKKLAKIVDDISTRYSTAQVAASLDALKDLGFTRAPWSGVTFAFSDVVEPPERNELVAQSEEEVAKINEQYDLGFYTEEDRRQAIIDVWTKCGEEVSKAIEKNFDPKNNLSIIVESGARGNMTQINQISGVRGLVNNPKGEIIPRPVESNYRRGLSVLEYFISEHGARKGLADTALRTAESGYLTRRLVDVSQDVIVREEDCGTKRGLTMRVADRDENGNLTLVKAADGGPYSRLLAADVIDPADGTTVLYKRDDALSMDVLNDLVAHGVEEVQARSVLTCESKRGVCAKCYGWSLATNTLVDVGEAVGIVAAQSIGEPGTQLTLRSFHSGGVAAASDITQGLPRVTELFEARTPKGEAPIAEFAGVVKVENTDHGRQITLTPDDTSVEPIVYTDTRRAPMLVKNGDHVAAGDQLVEGSVDPKKILRILGPRAAQVNIVNEVHTVYRSQGVDIHDKHIEVIVHQMLRRVTVIDSGDTPLLPGELVDQARFKAANKETIKNGGKPAAARPELMGITKASLATDSWLSAASFQETTRVLTEAALSQKVDDLKGLKENVIIGKLIPAGTGLARYQNAVVEPDKAIRDTIYPNFGLGADMDGSQTDFSDADLSDVDFSNIDFGDLKLGDDFNPDDFIDDQGGNDFGADSGNDLV*