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L1_008_000M1_scaffold_1303

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1303_1
Mobiluncus mulieris, Mobiluncus, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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2..451
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003784F14
Uncharacterized protein {ECO:0000313|EMBL:EEZ91048.1}; TaxID=596328 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Mobiluncus.;" source="Mobiluncus mulieris 28-1.;"
hypothetical protein
L1_008_000M1_scaffold_1303_2
unknown

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comp(605..781)
DNA (177bp) protein (59aa)

This feature has no annotations

L1_008_000M1_scaffold_1303_3
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(730..2190)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KRH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67674.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L1_008_000M1_scaffold_1303_4
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2168..3145)
DNA (978bp) protein (326aa)
TnpX site-specific recombinase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PBT9_9FIRM
TnpX site-specific recombinase {ECO:0000313|EMBL:EDS11064.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
putative site-specific recombinase
L1_008_000M1_scaffold_1303_5
Pseudomonas oryzihabitans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3158..5071)
DNA (1914bp) protein (638aa)
hypothetical protein n=1 Tax=Pseudomonas sp. 313 RepID=UPI0002EE76F2
ATPase AAA {ECO:0000313|EMBL:KIZ52996.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryzihabitans.;"
Fis family transcriptional regulator
L1_008_000M1_scaffold_1303_6
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(5086..6942)
DNA (1857bp) protein (619aa)
Sigma54 specific transcriptional regulator n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LWI6_THEPS
sigma-54 specific transcriptional regulator
Sigma54 specific transcriptional regulator {ECO:0000313|EMBL:AFV12354.1}; TaxID=1089553 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
L1_008_000M1_scaffold_1303_7

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7457..8902
DNA (1446bp) protein (482aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter (Fragment) n=1 Tax=human gut metagenome RepID=K1SMI8_9ZZZZ
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:EKC61867.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L1_008_000M1_scaffold_1303_8
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8946..10031
DNA (1086bp) protein (362aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
UPI0003D598C4 related cluster n=1 Tax=unknown RepID=UPI0003D598C4
butyrate kinase
L1_008_000M1_scaffold_1303_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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10069..11481
DNA (1413bp) protein (471aa)
Aldehyde-alcohol dehydrogenase domain protein n=2 Tax=Oscillibacter RepID=U2R8I7_9FIRM
Aldehyde-alcohol dehydrogenase domain protein {ECO:0000313|EMBL:ERK64849.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L1_008_000M1_scaffold_1303_10
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11585..12169
DNA (585bp) protein (195aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Phosphate propanoyltransferase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QLG6_9CLOT
hypothetical protein
L1_008_000M1_scaffold_1303_11
Corynebacterium glutamicum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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12234..13811
DNA (1578bp) protein (526aa)
Major facilitator family transporter n=1 Tax=Bacillus sp. SG-1 RepID=A6CHD2_9BACI
permease of the major facilitator superfamily
Permease, major facilitator superfamily {ECO:0000313|EMBL:CAF19095.1}; Permeases of the major facilitator superfamily {ECO:0000313|EMBL:BAB97773.1}; TaxID=196627 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /; LMG 3730 / NCIMB 10025).;"
L1_008_000M1_scaffold_1303_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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13860..16421
DNA (2562bp) protein (854aa)
Putative formate C-acetyltransferase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AJZ8_9CLOT
Putative formate C-acetyltransferase {ECO:0000313|EMBL:EFC97859.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
PFL2/glycerol dehydratase family glycyl radical enzyme
L1_008_000M1_scaffold_1303_13
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16607..17626
DNA (1020bp) protein (340aa)
Putative pyruvate formate-lyase activating enzyme n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QAB5_9FIRM
Putative pyruvate formate-lyase activating enzyme {ECO:0000313|EMBL:CDC29984.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
glycyl-radical enzyme activating protein family
L1_008_000M1_scaffold_1303_14
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

17694..18905
DNA (1212bp) protein (404aa)
adh1; alcohol dehydrogenase (EC:1.1.1.1)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITI8_9CLOT
Tax=RBG_16_Chloroflexi_57_8_curated
L1_008_000M1_scaffold_1303_15
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19024..20364
DNA (1341bp) protein (447aa)
RNA polymerase sigma-54 factor n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M4L2_9FIRM
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EOS65910.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
RNA polymerase sigma-54 factor
L1_008_000M1_scaffold_1303_16
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20858..21196)
DNA (339bp) protein (113aa)
Site-specific recombinase, phage integrase family n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PTL3_9FIRM
Site-specific recombinase XerD
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDS20960.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L1_008_000M1_scaffold_1303_17
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21215..21514)
DNA (300bp) protein (100aa)
Integrase/recombinase phage integrase family n=1 Tax=Clostridium sp. CAG:81 RepID=R5FWV7_9CLOT
Integrase/recombinase phage integrase family {ECO:0000313|EMBL:CCY09323.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Site-specific recombinase XerD
L1_008_000M1_scaffold_1303_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21577..21741)
DNA (165bp) protein (55aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=R0AHS0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ15102.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
type I restriction-modification system subunit S
L1_008_000M1_scaffold_1303_19
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22023..23105)
DNA (1083bp) protein (361aa)
Fic family protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5YA23_9FIRM
Fic family protein {ECO:0000313|EMBL:CDA13452.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
Fic family protein
L1_008_000M1_scaffold_1303_20
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23115..23729)
DNA (615bp) protein (205aa)
Fic family protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NJ55_9CLOT
Fic family protein {ECO:0000313|EMBL:CDC11225.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
Protein involved in cell division
L1_008_000M1_scaffold_1303_21
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23744..24229)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q7Q8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32753.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L1_008_000M1_scaffold_1303_22
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24250..24438)
DNA (189bp) protein (63aa)
DNA-binding protein excisionase family n=1 Tax=Clostridium sp. CAG:678 RepID=R5L3T1_9CLOT
DNA-binding protein excisionase family {ECO:0000313|EMBL:CCY67702.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
excisionase family DNA binding domain-containing protein
L1_008_000M1_scaffold_1303_23
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

24803..25081
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UP80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC72587.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L1_008_000M1_scaffold_1303_24
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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25091..25243
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ISI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43259.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Displaying 24 items

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