ggKbase home page

L1_008_000M1_scaffold_170

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_170_1
unknown

Not on your lists

1..360
DNA (360bp) protein (120aa)

This feature has no annotations

L1_008_000M1_scaffold_170_2
unknown

Not on your lists

comp(347..685)
DNA (339bp) protein (113aa)

This feature has no annotations

L1_008_000M1_scaffold_170_3
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(1796..2647)
DNA (852bp) protein (284aa)
metallo-beta-lactamase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2EB98
Uncharacterized protein {ECO:0000313|EMBL:CCZ45756.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
metallo-beta-lactamase
L1_008_000M1_scaffold_170_4
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(2674..3537)
DNA (864bp) protein (288aa)
Radical SAM domain protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QPC8_9CLOT
Radical SAM domain protein
Tax=GWF2_Clostridiales_36_10_curated
L1_008_000M1_scaffold_170_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3729..6569
DNA (2841bp) protein (947aa)
Repeat protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQV8_9FIRM
Repeat protein {ECO:0000313|EMBL:EEQ60402.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000M1_scaffold_170_6
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6700..7356
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M197_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64799.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Transcriptional regulator
L1_008_000M1_scaffold_170_7
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7433..8677
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2ALD1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ25264.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
macrolide-efflux protein
L1_008_000M1_scaffold_170_8
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9175..12531)
DNA (3357bp) protein (1119aa)
PAS domain S-box protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BE78_9CLOT
PAS domain S-box protein {ECO:0000313|EMBL:ERI70495.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
two-component system sensor histidine kinase
L1_008_000M1_scaffold_170_9
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12521..13804)
DNA (1284bp) protein (428aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CT25_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI70496.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ABC-type sugar transport system, periplasmic component
L1_008_000M1_scaffold_170_10
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13829..18472)
DNA (4644bp) protein (1548aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037292E9
PAS domain S-box protein {ECO:0000313|EMBL:EGN41972.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_008_000M1_scaffold_170_11
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18572..22159)
DNA (3588bp) protein (1196aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HLT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97447.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L1_008_000M1_scaffold_170_12
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23368..29370
DNA (6003bp) protein (2001aa)
RCC1 repeat-containing protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U7G8_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:EPR11514.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
RCC1 repeat-containing protein
L1_008_000M1_scaffold_170_13
unknown

Not on your lists

29324..30175
DNA (852bp) protein (284aa)

This feature has no annotations

L1_008_000M1_scaffold_170_14
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

30196..32682
DNA (2487bp) protein (829aa)
Bacterial Ig-like domain (Group 2)./Fibronectin type III domain n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BTU8_9FIRM
Chitin binding protein {ECO:0000313|EMBL:AKB27733.1}; TaxID=1434120 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae T4/M.;"
hypothetical protein
L1_008_000M1_scaffold_170_15
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33433..34155)
DNA (723bp) protein (241aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RSE4_9CLOT
16S rRNA (guanine(527)-N(7))-methyltransferase GidB
L1_008_000M1_scaffold_170_16
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34192..34866)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD142 RepID=J7TKF0_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJP93852.1}; TaxID=718224 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD142.;"
Acetyltransferase, GNAT
L1_008_000M1_scaffold_170_17
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34878..36257)
DNA (1380bp) protein (460aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000255|HAMAP-Rule:MF_00046}; EC=6.3.2.8 {ECO:0000255|HAMAP-Rule:MF_00046};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000255|HAMAP-Rule:MF_00046}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
UDP-N-acetylmuramate--L-alanine ligase n=7 Tax=Clostridium thermocellum RepID=MURC_CLOTH
UDP-N-acetylmuramate--L-alanine ligase
L1_008_000M1_scaffold_170_18
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36405..36686
DNA (282bp) protein (94aa)
regulatory protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000287A717
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
spoVG; putative septation protein SpoVG
L1_008_000M1_scaffold_170_19
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

36988..38460
DNA (1473bp) protein (491aa)
anthranilate synthase component I (EC:4.1.3.27)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NCL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB95622.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L1_008_000M1_scaffold_170_20
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

38460..39032
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MHZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB95624.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
glutamine amidotransferase of anthranilate synthase
L1_008_000M1_scaffold_170_21
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39087..40106
DNA (1020bp) protein (340aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
Anthranilate phosphoribosyltransferase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M1H9_CLOCD
anthranilate phosphoribosyltransferase
L1_008_000M1_scaffold_170_22
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40120..40914
DNA (795bp) protein (265aa)
Indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
Indole-3-glycerol phosphate synthase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M1H8_CLOCD
L1_008_000M1_scaffold_170_23
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40933..41574
DNA (642bp) protein (214aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EA59_9CLOT
L1_008_000M1_scaffold_170_24
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

41626..42822
DNA (1197bp) protein (399aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VSE6_9FIRM
L1_008_000M1_scaffold_170_25
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42815..43621
DNA (807bp) protein (269aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EA61_9CLOT
L1_008_000M1_scaffold_170_26
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(43815..44159)
DNA (345bp) protein (115aa)
aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
aspartate decarboxylase n=1 Tax=Niabella aurantiaca RepID=UPI000362553C
L1_008_000M1_scaffold_170_27
Prevotella sp. CAG:1092, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44184..45038)
DNA (855bp) protein (285aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1262919 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1092.;"
Pantothenate synthetase n=1 Tax=Prevotella sp. CAG:1092 RepID=R5PMX8_9BACT
pantoate--beta-alanine ligase
L1_008_000M1_scaffold_170_28
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45081..45887)
DNA (807bp) protein (269aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JJK8_9FIRM
L1_008_000M1_scaffold_170_29
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46423..48036
DNA (1614bp) protein (538aa)
CTP synthase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
CTP synthase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JRW9_CELLD
L1_008_000M1_scaffold_170_30
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

48240..51338
DNA (3099bp) protein (1033aa)
S-layer domain-containing protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MHP6_9FIRM
S-layer domain-containing protein {ECO:0000313|EMBL:CDB93826.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
S-layer protein
Displaying items 1-30 of 95 in total

View Taxonomy