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L2_021_000G1_scaffold_95

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Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_021_000G1_scaffold_95_1
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(436..1935)
DNA (1500bp) protein (500aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
Lysine--tRNA ligase n=2 Tax=Lactobacillus casei group RepID=K6RVN8_LACCA
Lysyl-tRNA synthetase, class II
L2_021_000G1_scaffold_95_2
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2072..3073)
DNA (1002bp) protein (334aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
tRNA-dihydrouridine synthase n=4 Tax=Lactobacillus casei group RepID=Q034W6_LACC3
tRNA-dihydrouridine synthase
L2_021_000G1_scaffold_95_3
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3136..4020)
DNA (885bp) protein (295aa)
33 kDa chaperonin n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp14 RepID=S2RQG5_LACPA
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
hslO; Hsp33-like chaperonin
L2_021_000G1_scaffold_95_4
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4277..5176)
DNA (900bp) protein (300aa)
Uncharacterized protein n=13 Tax=Lactobacillus casei group RepID=Q034W4_LACC3
hypothetical protein
Cell surface protein {ECO:0000313|EMBL:ERN50417.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
L2_021_000G1_scaffold_95_5
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5396..6454)
DNA (1059bp) protein (353aa)
Cell surface protein n=21 Tax=Lactobacillus casei group RepID=F2MCM6_LACCC
Cell surface protein
Cell surface protein {ECO:0000313|EMBL:EPC41778.1}; TaxID=1256199 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp74.;"
L2_021_000G1_scaffold_95_6
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6451..7281)
DNA (831bp) protein (277aa)
Cell surface protein n=2 Tax=Lactobacillus casei group RepID=K6SAN4_LACCA
cell surface protein
Cell surface protein {ECO:0000313|EMBL:GAN43360.1}; TaxID=1435040 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 1981.;"
L2_021_000G1_scaffold_95_7
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7259..9517)
DNA (2259bp) protein (753aa)
Uncharacterized protein n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp14 RepID=S2RQG9_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EPC69558.1}; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
hypothetical protein
L2_021_000G1_scaffold_95_8
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9969..12116)
DNA (2148bp) protein (716aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
ATP-dependent zinc metalloprotease FtsH n=38 Tax=Lactobacillus casei group RepID=B3WAN9_LACCB
Cell division protein FtsH
L2_021_000G1_scaffold_95_9
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12178..12723)
DNA (546bp) protein (182aa)
hypoxanthine-guanine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:EKQ08165.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EKQ08165.1};; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
Hypoxanthine phosphoribosyltransferase n=50 Tax=Lactobacillus casei group RepID=C5F6K8_LACPA
L2_021_000G1_scaffold_95_10
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12720..14030)
DNA (1311bp) protein (437aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
tRNA(Ile)-lysidine synthase n=2 Tax=Lactobacillus casei group RepID=Q034V7_LACC3
tRNA(Ile)-lysidine synthetase, MesJ
L2_021_000G1_scaffold_95_11
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14108..14593)
DNA (486bp) protein (162aa)
S1 family RNA-binding protein n=54 Tax=Lactobacillus casei group RepID=B3WAP2_LACCB
RNA binding protein, contains ribosomal protein S1 domain
Uncharacterized protein {ECO:0000313|EMBL:EPC90566.1}; TaxID=1256213 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp49.;"
L2_021_000G1_scaffold_95_12
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14803..15234)
DNA (432bp) protein (144aa)
Septum formation initiator n=52 Tax=Lactobacillus casei group RepID=D8GCN6_LACCZ
cell division protein DivIC
Uncharacterized protein {ECO:0000313|EMBL:BAN72793.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
L2_021_000G1_scaffold_95_13
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15304..15567)
DNA (264bp) protein (88aa)
YabO n=57 Tax=Lactobacillus casei group RepID=B3WAP4_LACCB
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit
S4 RNA-binding domain protein {ECO:0000313|EMBL:GAN37323.1}; TaxID=1435038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 0644.;"
L2_021_000G1_scaffold_95_14
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15571..17148)
DNA (1578bp) protein (526aa)
Polysaccharide transporter protein n=9 Tax=Lactobacillus paracasei subsp. paracasei RepID=S6CII0_LACPA
Polysaccharide transporter protein {ECO:0000313|EMBL:BAN72795.1}; TaxID=1226298 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei JCM 8130.;"
low temperature requirement B -like protein
L2_021_000G1_scaffold_95_15
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17269..20793)
DNA (3525bp) protein (1175aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
Transcription-repair-coupling factor n=3 Tax=Lactobacillus casei group RepID=Q034V2_LACC3
transcription-repair coupling factor
L2_021_000G1_scaffold_95_16
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20866..21423)
DNA (558bp) protein (186aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
Peptidyl-tRNA hydrolase n=3 Tax=Lactobacillus casei group RepID=PTH_LACC3
L2_021_000G1_scaffold_95_17
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22098..23078
DNA (981bp) protein (327aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1256204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp14.;"
L-lactate dehydrogenase n=62 Tax=Lactobacillus RepID=LDH_LACCA
L-lactate dehydrogenase
L2_021_000G1_scaffold_95_18
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23485..24855
DNA (1371bp) protein (457aa)
L,D-transpeptidase/peptidoglycan binding protein {ECO:0000313|EMBL:EKQ19117.1}; EC=2.-.-.- {ECO:0000313|EMBL:EKQ19117.1};; TaxID=1051661 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UW4.;"
Uncharacterized protein n=18 Tax=Lactobacillus casei group RepID=D8GCP2_LACCZ
hypothetical protein
L2_021_000G1_scaffold_95_19
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25357..26022
DNA (666bp) protein (222aa)
CBS domain containing protein n=48 Tax=Lactobacillus casei group RepID=B3WAQ3_LACCB
CBS domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:EPC38874.1}; TaxID=1256225 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp225.;"
L2_021_000G1_scaffold_95_20
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26409..27002
DNA (594bp) protein (198aa)
Uncharacterized protein n=3 Tax=Lactobacillus casei group RepID=Q034U6_LACC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ71276.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_021_000G1_scaffold_95_21
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27396..27707
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Lactobacillus casei (strain ATCC 334) RepID=Q034U5_LACC3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ71277.1}; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
L2_021_000G1_scaffold_95_22
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27951..28586)
DNA (636bp) protein (212aa)
gltD; glutamate synthase subunit beta (EC:1.4.1.13)
NADPH-dependent glutamate synthase (Small subunit) {ECO:0000313|EMBL:EKQ16979.1}; EC=1.-.-.- {ECO:0000313|EMBL:EKQ16979.1};; EC=1.4.1.13 {ECO:0000313|EMBL:EKQ16979.1};; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
Glutamate synthase (NADH) small subunit n=3 Tax=Lactobacillus casei group RepID=Q034U4_LACC3
L2_021_000G1_scaffold_95_23
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28673..29380)
DNA (708bp) protein (236aa)
gltD; glutamate synthase subunit beta (EC:1.4.1.13)
NADPH-dependent glutamate synthase (Small subunit) {ECO:0000313|EMBL:EKQ16979.1}; EC=1.-.-.- {ECO:0000313|EMBL:EKQ16979.1};; EC=1.4.1.13 {ECO:0000313|EMBL:EKQ16979.1};; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
Glutamate synthase (NADH) small subunit n=3 Tax=Lactobacillus casei group RepID=Q034U4_LACC3
L2_021_000G1_scaffold_95_24
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29516..33421)
DNA (3906bp) protein (1302aa)
Glutamate synthase (NADH) large subunit {ECO:0000313|EMBL:ABJ71279.1}; EC=1.4.1.14 {ECO:0000313|EMBL:ABJ71279.1};; TaxID=321967 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei (strain ATCC 334).;"
Glutamate synthase (NADH) large subunit n=1 Tax=Lactobacillus casei (strain ATCC 334) RepID=Q034U3_LACC3
glutamate synthase domain-containing 3
L2_021_000G1_scaffold_95_25
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33445..33972)
DNA (528bp) protein (176aa)
Glutamate synthase [NADPH] large chain {ECO:0000313|EMBL:EKQ00010.1}; EC=1.-.-.- {ECO:0000313|EMBL:EKQ00010.1};; EC=1.4.1.13 {ECO:0000313|EMBL:EKQ00010.1};; TaxID=1051651 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 21/1.;"
Glutamate synthase [NADPH] large chain n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp22 RepID=S2MW36_LACPA
Glutamate synthase
L2_021_000G1_scaffold_95_26
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34246..34767)
DNA (522bp) protein (174aa)
Substrate-specific component of a predicted queuosine-regulated ECF transporter n=1 Tax=Lactobacillus casei T71499 RepID=K6R7R8_LACCA
Substrate-specific component QueT of predicted queuosine-regulated ECF transporter
Membrane protein {ECO:0000313|EMBL:GAN43377.1}; TaxID=1435040 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 1981.;"
L2_021_000G1_scaffold_95_27
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34951..35334)
DNA (384bp) protein (128aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1435040 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 1981.;"
mRNA interferase n=53 Tax=Lactobacillus casei group RepID=B3WAQ8_LACCB
Programmed cell death toxin YdcE
L2_021_000G1_scaffold_95_28
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(35354..35602)
DNA (249bp) protein (83aa)
Uncharacterized protein n=47 Tax=Lactobacillus casei group RepID=D8GCQ1_LACCZ
Programmed cell death antitoxin YdcD
Uncharacterized protein {ECO:0000313|EMBL:EPC87433.1}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
L2_021_000G1_scaffold_95_29
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(35670..36806)
DNA (1137bp) protein (379aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1051659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei UCD174.;"
Alanine racemase n=3 Tax=Lactobacillus casei group RepID=ALR_LACC3
alanine racemase
L2_021_000G1_scaffold_95_30
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(36793..37167)
DNA (375bp) protein (125aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1256212 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp43.;"
Holo-[acyl-carrier-protein] synthase n=1 Tax=Lactobacillus casei W56 RepID=K0MXY2_LACCA
Holo-acyl-carrier protein synthase
Displaying items 1-30 of 89 in total

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