ggKbase home page

L2_031_000G1_scaffold_151

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_000G1_scaffold_151_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(177..851)
DNA (675bp) protein (225aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=N9YSF8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD14301.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_031_000G1_scaffold_151_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1199..1606
DNA (408bp) protein (136aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R044_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87233.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_031_000G1_scaffold_151_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2387..4318
DNA (1932bp) protein (644aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
Threonine--tRNA ligase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1J8_CLOBU
thrS; threonyl-tRNA synthetase
L2_031_000G1_scaffold_151_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4388..5683)
DNA (1296bp) protein (432aa)
UPI0003D60B64 related cluster n=1 Tax=unknown RepID=UPI0003D60B64
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA {ECO:0000313|EMBL:KJZ97274.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein
L2_031_000G1_scaffold_151_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5796..8393)
DNA (2598bp) protein (866aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRX8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30361.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_031_000G1_scaffold_151_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8421..9008)
DNA (588bp) protein (196aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSF3_CLOBU
5-formyltetrahydrofolate cyclo-ligase
L2_031_000G1_scaffold_151_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9033..9455)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AC53_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87203.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_031_000G1_scaffold_151_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9728..10495)
DNA (768bp) protein (256aa)
Formate/nitrite transporter n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1J6_CLOBU
Formate efflux transporter (2.A.44 family) {ECO:0000313|EMBL:KJZ87191.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ywcJ; transporter YwcJ
L2_031_000G1_scaffold_151_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10943..12673)
DNA (1731bp) protein (577aa)
Neopullulanase {ECO:0000313|EMBL:KJZ87128.1}; EC=3.2.1.135 {ECO:0000313|EMBL:KJZ87128.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Cyclomaltodextrinase (EC:3.2.1.54)
Neopullulanase n=2 Tax=Clostridium butyricum RepID=B1R037_CLOBU
L2_031_000G1_scaffold_151_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12877..13548
DNA (672bp) protein (224aa)
DNA-bindng response regulator, AraC family n=4 Tax=Clostridium butyricum RepID=B1R036_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30356.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
transcriptional regulator, AraC family
L2_031_000G1_scaffold_151_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13682..15940)
DNA (2259bp) protein (753aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
malP; Maltodextrin phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSF0_CLOBU
L2_031_000G1_scaffold_151_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16201..16800
DNA (600bp) protein (200aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:KJZ97320.1}; EC=1.3.8.1 {ECO:0000313|EMBL:KJZ97320.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JF72_CLOBU
hypothetical protein
L2_031_000G1_scaffold_151_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16893..17426)
DNA (534bp) protein (178aa)
UPI0003D6957A related cluster n=1 Tax=unknown RepID=UPI0003D6957A
RDD domain containing protein {ECO:0000313|EMBL:KJZ87226.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_031_000G1_scaffold_151_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17413..18408)
DNA (996bp) protein (332aa)
Protease IV {ECO:0000313|EMBL:KJZ87126.1}; EC=3.4.21.- {ECO:0000313|EMBL:KJZ87126.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
sppA; putative signal peptide peptidase SppA (EC:3.4.21.-)
UPI0003A591BF related cluster n=1 Tax=unknown RepID=UPI0003A591BF
L2_031_000G1_scaffold_151_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18678..19229
DNA (552bp) protein (184aa)
Carbonic anhydrase (EC:4.2.1.1)
Carbonate dehydratase n=4 Tax=Clostridium butyricum RepID=B1R031_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97323.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_031_000G1_scaffold_151_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19315..20190)
DNA (876bp) protein (292aa)
Aldose epimerase family protein n=2 Tax=Clostridium butyricum RepID=B1R030_CLOBU
LacX protein, plasmid {ECO:0000313|EMBL:KJZ87149.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
lacX; protein LacX, chromosomal
L2_031_000G1_scaffold_151_17
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20248..21183)
DNA (936bp) protein (312aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
lacC; tagatose-6-phosphate kinase LacC (EC:2.7.1.144)
Tagatose-6-phosphate kinase n=4 Tax=Clostridium butyricum RepID=B1R029_CLOBU
L2_031_000G1_scaffold_151_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21553..22407)
DNA (855bp) protein (285aa)
Tagatose 1,6-bisphosphate aldolase {ECO:0000313|EMBL:KJZ87150.1}; EC=4.1.2.40 {ECO:0000313|EMBL:KJZ87150.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
gatY; D-tagatose-1,6-bisphosphate aldolase subunit GatY (EC:4.1.2.40)
Class II aldolase, tagatose bisphosphate family n=3 Tax=Clostridium butyricum RepID=B1R028_CLOBU
L2_031_000G1_scaffold_151_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22452..22970)
DNA (519bp) protein (173aa)
Galactose-6-phosphate isomerase, LacB subunit {ECO:0000313|EMBL:KJZ87228.1}; EC=5.3.1.26 {ECO:0000313|EMBL:KJZ87228.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
lacB; galactose-6-phosphate isomerase subunit LacB (EC:5.3.1.26)
Ribose-5-phosphate isomerase B n=4 Tax=Clostridium butyricum RepID=B1R027_CLOBU
L2_031_000G1_scaffold_151_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22992..23417)
DNA (426bp) protein (142aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EEP55490.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EEP55490.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
lacA2; galactose-6-phosphate isomerase subunit LacA (EC:5.3.1.26)
Ribose-5-phosphate isomerase B n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9H5_CLOBU
L2_031_000G1_scaffold_151_21
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23444..24853)
DNA (1410bp) protein (470aa)
PTS system enzyme IIC component n=2 Tax=Clostridium butyricum RepID=B1R025_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97333.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
PTS system enzyme IIC component (galactitol/fructose specific)
L2_031_000G1_scaffold_151_22
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24874..25179)
DNA (306bp) protein (102aa)
Phosphoglucosamine mutase {ECO:0000313|EMBL:KJZ97386.1}; EC=5.4.2.10 {ECO:0000313|EMBL:KJZ97386.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
PTS system IIB component n=3 Tax=Clostridium butyricum RepID=B1R024_CLOBU
PTS system galactitol/fructose specific transporter subunit IIB
L2_031_000G1_scaffold_151_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25219..25686)
DNA (468bp) protein (156aa)
Pts system enzyme iibc component n=2 Tax=Clostridium butyricum RepID=B1R023_CLOBU
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pump {ECO:0000313|EMBL:KJZ97367.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
PTS system galactitol/fructose specific transporter subunit IIBC
L2_031_000G1_scaffold_151_24
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25815..26576)
DNA (762bp) protein (254aa)
Lactose phosphotransferase system repressor n=3 Tax=Clostridium butyricum RepID=B1R022_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94264.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
lacR; lactose phosphotransferase system repressor
L2_031_000G1_scaffold_151_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27198..29024)
DNA (1827bp) protein (609aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=4 Tax=Clostridium butyricum RepID=B1QZZ5_CLOBU
L2_031_000G1_scaffold_151_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29695..30768)
DNA (1074bp) protein (358aa)
UPI0003D5A6F3 related cluster n=1 Tax=unknown RepID=UPI0003D5A6F3
Uncharacterized protein {ECO:0000313|EMBL:ETI91663.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
S-layer protein
L2_031_000G1_scaffold_151_27
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30857..32173)
DNA (1317bp) protein (439aa)
PTS system, galactose-specific IIC component {ECO:0000313|EMBL:KJZ97358.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ97358.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A222_CLOBU
hypothetical protein
L2_031_000G1_scaffold_151_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32308..35511)
DNA (3204bp) protein (1068aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEI4_CLOBU
RND multidrug efflux transporter Acriflavin resistance protein {ECO:0000313|EMBL:KJZ87139.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative multidrug efflux pump, membrane protein
L2_031_000G1_scaffold_151_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35516..36766)
DNA (1251bp) protein (417aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSF6_CLOBU
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ENZ30551.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
RND family efflux transporter MFP subunit
L2_031_000G1_scaffold_151_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37090..37575
DNA (486bp) protein (162aa)
MarR-family transcriptional regulator n=4 Tax=Clostridium butyricum RepID=B1QZY9_CLOBU
Transcriptional regulator, MarR family {ECO:0000313|EMBL:KJZ87237.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
MarR-family transcriptional regulator
Displaying items 1-30 of 53 in total

View Taxonomy