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L3_072_000M1_scaffold_5642_1

Organism: dasL3_072_000M1_concoct_111_sub_fa

near complete RP 41 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(3..395)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 131.0
  • Bit_score: 250
  • Evalue 1.50e-64
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 131.0
  • Bit_score: 250
  • Evalue 7.60e-64
DNA-directed RNA polymerase subunit beta' n=2 Tax=Clostridium RepID=D8GJ47_CLOLD similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 131.0
  • Bit_score: 250
  • Evalue 5.40e-64

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Taxonomy

Clostridium autoethanogenum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 393
TTGTTTGAACTGAATAACTTTGATTCCATTCAAATCGGTCTGGCTTCTCCGGAGAAGATCCGCGAGTGGTCCAGCGGGGAAGTAAAGAAGCCGGAAACGATCAACTACAGAACGCTCAAGCCCGAACGCGACGGCTTGTATTGCGAGCGCATTTTCGGCCCGACAAAGGACTGGGAGTGCGCATGCGGAAAGTATAAGCGCGGCGCGAGGTATAAGGGGCTTGTCTGCGACCGCTGCGGTGTGGAGATCACGCGCGCCAAGGTTCGCAGAGAGCGTATGGGACACATTGAGCTGGCGGCTCCGGTTTCACATATCTGGTATTTTAAGGGAATTCCCAGCCGTATCGGTATGATTTTGGACATTACGCCCAAGGATCTGGAAAAGGTGCTGTAT
PROTEIN sequence
Length: 131
LFELNNFDSIQIGLASPEKIREWSSGEVKKPETINYRTLKPERDGLYCERIFGPTKDWECACGKYKRGARYKGLVCDRCGVEITRAKVRRERMGHIELAAPVSHIWYFKGIPSRIGMILDITPKDLEKVLY