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L3_072_000M1_scaffold_5642_2

Organism: dasL3_072_000M1_concoct_111_sub_fa

near complete RP 41 / 55 MC: 1 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(433..2220)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 601.0
  • Bit_score: 885
  • Evalue 4.30e-255
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 601.0
  • Bit_score: 885
  • Evalue 2.10e-254
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LUM2_CLOCD similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 601.0
  • Bit_score: 885
  • Evalue 1.50e-254

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Taxonomy

[Clostridium] clariflavum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1788
ATGATCCCGTTCCTTGAAAACGATGACGCGTCCCGTGCGCTGATGGGCGCGAACATGCAGCGTCAGGCAGTGCCGCTGCTGGTGCCGGAGGCTCCGATTATCGGAACGGGCATCGAGTATAAAGCGGGCATGGATTCCGGCGTTTCCATTCTAAGCAAAACGGACGGCGTGGTTAAGTACGTGGACGCGCGCAAGATCGTTGTTCTTGGCGACGACGGCGCGGAATACACCTATGAGCTGCTCAAGTTTAAGCGCAGCAACCAGGGCACCTGCATCAATCAGCGGCCGATCGTGAAGGTTGGCGAGCGCGTGACTGCCCGCCAGACGATTGCAGACGGCCCTTCTACCGATCAGGGCGAGATCGCGCTGGGAAGAAACATTCTGATCGCGTTCATGCCGTGGGAAGGTTATAACTATGAGGACGCCGTTCTGCTCAGTGAAAAGCTGGTTAAAAACGATATTTTCACCTCTATTCATATTGAAAAATATGAGTGCGAGGCGCGCGATACCAAGCTGGGGCCGGAGGAGATCACGGCGGACATTCCGAGCATCAGCGAGGACAGCCTGAAGAATTTGGATGAAAACGGCATTATCCGCATCGGCGCGGAGGTTAGGCCGGGTGATATTCTGGTGGGCAAGGTAACGCCGAAGGGCGAAACGGAAATGACGGCGGAGGAGCGTCTCCTGCGCGCGATTTTCGGTGAAAAATCCCGCGAGGTGCGCGATACCTCGCTGCGCGTTCCGCACGGCGAAGCCGGAATCATTGTGGACGTAAAGGTGTTTACGCGCGAAAATAAAGACGAGCTTTCTCCGGGCGTGAGCAAGATGGTTCGCGTGTATATTGCGCAGAAGCGCAAAATTTCCGTGGGCGATAAAATGGCGGGACGGCACGGAAACAAGGGCGTTATTTCCCGTATTTTGCCGGAGGAGGATATGCCGTTTTTGCCGGATGGAACGCCGGTGGAGATTTTGCTTAACCCGTTGGGCGTGCCGTCGCGTATGAACGTCGGGCAGGTGTTAGAGGTTCACTTGGGCCGCGCGGCGAAGAAGCTGGGCTGGCATGTGGCCACGCCGGTATTCGACGGCGCGCATGAAGACGATATTGAAAAGGCGCTGGTCGACGCGGGGCTTGAAACCAACGGAAAGACGATTCTTTACGACGGCCGCACGGGCGAGCCGTTTGATAACCCCGTAACGGTCGGATATATGTACTACCTGAAGCTGGTTCACTTGGTTGACGATAAGATCCATGCGCGTTCTACAGGCCCGTATTCCATGGTTACGCAGCAGCCGCTTGGCGGTAAAGCGCAGTTCGGCGGCCAGCGTTTCGGCGAAATGGAGGTTTGGGCGTTGGAGGCCTATGGCGCGGCGCATACGCTTCAGGAGATTCTTACGATCAAGTCCGACGACGTGGTAGGCCGCGTGAAGGCTTATGAGGCGATCATCAAGGGTGAAAATATTCCCGAACCGGGCATTCCGGAATCGTTCAAGGTTTTGCTGGAGGAGCTTCGCTCGCTGGCGCTTGATATCAGAATCCTTACGGAGGAGAAGAAAGAAGTTCATATGCGCGAGCTGCTGGATGACGACCGTGATGTGATGAGCATTCTGCCCGACGGAATGGAGGACGGTCCTCATGCGGAGACGGAGAATCCGCTGCTTGATCTGTTTGCCGACGATGATGACGACGAGCTGGAGCTTGACGGGCTTGACAGCGACGACGACGAGCTGAGTCTGGATGAACTGGATCTGTTCGGAAACGACGATGTGGAAGAGGACGAGGATTTTTAA
PROTEIN sequence
Length: 596
MIPFLENDDASRALMGANMQRQAVPLLVPEAPIIGTGIEYKAGMDSGVSILSKTDGVVKYVDARKIVVLGDDGAEYTYELLKFKRSNQGTCINQRPIVKVGERVTARQTIADGPSTDQGEIALGRNILIAFMPWEGYNYEDAVLLSEKLVKNDIFTSIHIEKYECEARDTKLGPEEITADIPSISEDSLKNLDENGIIRIGAEVRPGDILVGKVTPKGETEMTAEERLLRAIFGEKSREVRDTSLRVPHGEAGIIVDVKVFTRENKDELSPGVSKMVRVYIAQKRKISVGDKMAGRHGNKGVISRILPEEDMPFLPDGTPVEILLNPLGVPSRMNVGQVLEVHLGRAAKKLGWHVATPVFDGAHEDDIEKALVDAGLETNGKTILYDGRTGEPFDNPVTVGYMYYLKLVHLVDDKIHARSTGPYSMVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAHTLQEILTIKSDDVVGRVKAYEAIIKGENIPEPGIPESFKVLLEELRSLALDIRILTEEKKEVHMRELLDDDRDVMSILPDGMEDGPHAETENPLLDLFADDDDDELELDGLDSDDDELSLDELDLFGNDDVEEDEDF*