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L3_105_000M1_scaffold_37

Search features with annotation key words

Displaying items 1-30 of 153 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_37_1
unknown

Not on your lists

2..172
DNA (171bp) protein (57aa)

This feature has no annotations

L3_105_000M1_scaffold_37_2
Corallococcus sp. CAG:1435, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(252..2753)
DNA (2502bp) protein (834aa)
Dead/deah box helicase domain protein n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5WHX1_9DELT
Dead/deah box helicase domain protein {ECO:0000313|EMBL:CCZ95401.1}; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;"
DEAD/DEAH box helicase
L3_105_000M1_scaffold_37_3
Corallococcus sp. CAG:1435, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2740..3585)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5VY81_9DELT
Uncharacterized protein {ECO:0000313|EMBL:CCZ95400.1}; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;"
L3_105_000M1_scaffold_37_4
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3625..4128)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G854_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE22187.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
hypothetical protein
L3_105_000M1_scaffold_37_5
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4118..4990)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G5E8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE22186.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
hypothetical protein
L3_105_000M1_scaffold_37_6
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5003..5338)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IPP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE53491.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
L3_105_000M1_scaffold_37_7
Streptococcus sp. AS20, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5341..6408)
DNA (1068bp) protein (356aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=936578 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. AS20.;"
Cytosine-specific methyltransferase n=2 Tax=Streptococcus agalactiae RepID=S8SKA9_STRAG
cytosine specific DNA methyltransferase
L3_105_000M1_scaffold_37_8
Acetobacter sp. CAG:977, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6405..7445)
DNA (1041bp) protein (347aa)
modification methylase EcoRI (adenine-specificmethyltransferase EcoRI) (M.EcoRI) (EC:2.1.1.72)
Cytosine-specific methyltransferase n=1 Tax=Acetobacter sp. CAG:977 RepID=R5QIY8_9PROT
Cytosine-specific methyltransferase {ECO:0000313|EMBL:CCZ22231.1}; TaxID=1262685 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:977.;"
L3_105_000M1_scaffold_37_9
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7469..8551)
DNA (1083bp) protein (361aa)
Fic family protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MMJ1_9FIRM
Fic family protein {ECO:0000313|EMBL:EDS01075.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Fic family protein
L3_105_000M1_scaffold_37_10
[Eubacterium] cellulosolvens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8572..9177)
DNA (606bp) protein (202aa)
Protein involved in cell division n=1 Tax=Eubacterium cellulosolvens 6 RepID=I5AQA7_EUBCE
Protein involved in cell division {ECO:0000313|EMBL:EIM55980.1}; TaxID=633697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] cellulosolvens 6.;"
Protein involved in cell division
L3_105_000M1_scaffold_37_11
[Eubacterium] cellulosolvens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9198..9386)
DNA (189bp) protein (63aa)
DNA-binding protein, excisionase family n=1 Tax=Eubacterium cellulosolvens 6 RepID=I5AQA8_EUBCE
DNA-binding protein, excisionase family {ECO:0000313|EMBL:EIM55981.1}; TaxID=633697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] cellulosolvens 6.;"
excisionase family DNA binding domain-containing protein
L3_105_000M1_scaffold_37_12
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(9573..10943)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EJF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX91464.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
putative ATPase
L3_105_000M1_scaffold_37_13
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11583..11813
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L0M8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY66627.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L3_105_000M1_scaffold_37_14
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11803..12828
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KIR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY66628.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L3_105_000M1_scaffold_37_15
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12885..13145
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6NBA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05544.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L3_105_000M1_scaffold_37_16
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13365..13703
DNA (339bp) protein (113aa)
Bacterial mobilization protein MobC n=1 Tax=Clostridium leptum CAG:27 RepID=R6NH79_9CLOT
Bacterial mobilization protein MobC {ECO:0000313|EMBL:CDC05546.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Bacterial mobilisation protein (MobC).
L3_105_000M1_scaffold_37_17
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13720..14637
DNA (918bp) protein (306aa)
ParB-like protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L024_9CLOT
ParB-like protein {ECO:0000313|EMBL:CCY66631.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
ParB-like partition proteins
L3_105_000M1_scaffold_37_18
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14764..15969
DNA (1206bp) protein (402aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZ12_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDO59790.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Site-specific recombinase XerD
L3_105_000M1_scaffold_37_19
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16414..17565)
DNA (1152bp) protein (384aa)
Chaperone protein DnaJ n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9A9_9CLOT
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
dnaJ; Chaperone protein DnaJ
L3_105_000M1_scaffold_37_20
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17714..19546)
DNA (1833bp) protein (611aa)
Chaperone protein DnaK n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9B0_9CLOT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
chaperone protein DnaK
L3_105_000M1_scaffold_37_21
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19599..20186)
DNA (588bp) protein (196aa)
Protein GrpE n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KTP1_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
grpE; heat shock protein GrpE
L3_105_000M1_scaffold_37_22
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20161..21225)
DNA (1065bp) protein (355aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9B2_9CLOT
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
heat shock gene repressor HrcA
L3_105_000M1_scaffold_37_23
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21486..22853
DNA (1368bp) protein (456aa)
Extracellular solute-binding protein family 1 n=1 Tax=Paenibacillus lactis 154 RepID=G4HNA4_9BACL
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EHB54266.1}; Flags: Precursor;; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
family 1 extracellular solute-binding protein
L3_105_000M1_scaffold_37_24
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22850..24457
DNA (1608bp) protein (536aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E973_9CLOT
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EEG31976.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
L3_105_000M1_scaffold_37_25
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25108..25794)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6WMU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC95417.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
phosphoesterase
L3_105_000M1_scaffold_37_26
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25824..26450)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG28926.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_105_000M1_scaffold_37_27
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26546..28240)
DNA (1695bp) protein (565aa)
Fe-S oxidoreductase (EC:4.-.-.-)
B12 binding domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EEY6_9CLOT
B12 binding domain protein {ECO:0000313|EMBL:EEG29958.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
L3_105_000M1_scaffold_37_28
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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28392..28943
DNA (552bp) protein (184aa)
Reverse rubrerythrin-1 n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LFE8_9FIRM
Reverse rubrerythrin-1 {ECO:0000313|EMBL:EOS54472.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Rubrerythrin
L3_105_000M1_scaffold_37_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29192..30295)
DNA (1104bp) protein (368aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IMQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57678.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Phosphotransferase enzyme family.
L3_105_000M1_scaffold_37_30
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(30329..31264)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R1P2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35100.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
dTDP-glucose pyrophosphorylase
Displaying items 1-30 of 153 in total

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