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L3_105_000M1_scaffold_56_121

Organism: dasL3_105_000M1_metabat_metabat_15_fa_fa

near complete RP 45 / 55 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(130710..131471)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 242.0
  • Bit_score: 372
  • Evalue 4.40e-100
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.- 5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 241.0
  • Bit_score: 342
  • Evalue 7.50e-92
Pseudouridine synthase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EFL9_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 242.0
  • Bit_score: 372
  • Evalue 3.10e-100

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Taxonomy

[Clostridium] methylpentosum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 762
ATGGAAAAAATAAGAGTTCAGAAACTAATTGCAGACAGCGGTTATTGCTCCCGCAGAAAAGCGGAAGAATTAATTGAAAACAAGCAGGTTAAAGTCAACGGAAGGCTTGTTTCATTGGGAGATAAAGCGTTGCCGAAAGATGATATTATTGTTTCGGGAGAACATCTTTATATTAACCGAAAAAAACAGTATACTTATATTATGCTGCATAAACCGCGCGGATATGTTACAACAATGTCGGACGAAAAGGGAAGACGATGTGTTGCAGACTTGATTGCTGATATAGATGCGCGGGTTTTTCCGGTCGGACGTCTGGATGTTAATTCGGAGGGATTGTTGCTGTTTACCGATGACGGAAATTTTGCAAACGACCTAATGCACCCCAGCCGACACGTTTCAAAAACCTATCGGGTTACAGTGCGTCCCGATATTAATGATGAGCAGATTGTAAAGCTGTCAGAGGGCGTCGTGATTGACGGACGCCGTACCGCTCCGGCTGAGATACGGGTGTTGACCAAGGAGCCAAACAGGGTAGTCATGGAGATGATCATACGAGAAGGAAGAAACCGACAGATTCGCAAGATGTGCGAAACGGTCGGTTTAGAGGTGGCGCGTCTGAAACGAACGTCAATCGGACCGATTAAGCTCGGAATGTTGAAGCCCGGGGCATATCGGGAGTTGACCAAAGAAGAACTGAAAGCAATTCGCAATGCTATGGTCAAAACGGACAAGCGTGAAGCTCGTGACGAATTGAAAAAATAA
PROTEIN sequence
Length: 254
MEKIRVQKLIADSGYCSRRKAEELIENKQVKVNGRLVSLGDKALPKDDIIVSGEHLYINRKKQYTYIMLHKPRGYVTTMSDEKGRRCVADLIADIDARVFPVGRLDVNSEGLLLFTDDGNFANDLMHPSRHVSKTYRVTVRPDINDEQIVKLSEGVVIDGRRTAPAEIRVLTKEPNRVVMEMIIREGRNRQIRKMCETVGLEVARLKRTSIGPIKLGMLKPGAYRELTKEELKAIRNAMVKTDKREARDELKK*