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anamox1_curated_scaffold_769

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_769_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..551
DNA (549bp) protein (183aa)
Putative serine protein kinase, PrkA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK71_RUBGI
prkA; putative serine protein kinase PrkA
Putative serine protein kinase, PrkA {ECO:0000313|EMBL:BAL93408.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_769_2
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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562..1851
DNA (1290bp) protein (430aa)
UPF0229 protein RGE_00640 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK72_RUBGI
hypothetical protein
UPF0229 protein RGE_00640 {ECO:0000256|HAMAP-Rule:MF_01232}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_769_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1877..3436
DNA (1560bp) protein (520aa)
SpoVR family protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK73_RUBGI
SpoVR family protein
SpoVR family protein {ECO:0000313|EMBL:BAL93410.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_769_4
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3822..4502
DNA (681bp) protein (227aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNK9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ09927.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_769_5
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4588..6003)
DNA (1416bp) protein (472aa)
D-lactate dehydrogenase Tax=Caldimonas manganoxidans RepID=UPI0003800EA0
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:EHR68960.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
dld; D-lactate dehydrogenase (cytochrome)
anamox1_curated_scaffold_769_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6136..6720
DNA (585bp) protein (195aa)
ATP:cob(I)alamin adenosyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WT28_9BURK
ATP--cobalamin adenosyltransferase
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:EHR68962.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_769_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6790..7929)
DNA (1140bp) protein (380aa)
aroG; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase AroG (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK76_RUBGI
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_769_8
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8184..9410)
DNA (1227bp) protein (409aa)
threonine dehydratase (EC:4.3.1.19)
L-threonine ammonia-lyase {ECO:0000313|EMBL:ABM96723.1}; EC=4.3.1.19 {ECO:0000313|EMBL:ABM96723.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
L-threonine ammonia-lyase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SMD4_METPP
anamox1_curated_scaffold_769_9
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9407..10873)
DNA (1467bp) protein (489aa)
peptidase C69 Tax=Caldimonas manganoxidans RepID=UPI000370DCD8
Putative Zn-dependent protease-like protein {ECO:0000313|EMBL:EHR68971.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
tldD; protein TldD
anamox1_curated_scaffold_769_10
unknown

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11094..11345
DNA (252bp) protein (84aa)

This feature has no annotations

anamox1_curated_scaffold_769_11
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11355..12191)
DNA (837bp) protein (279aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Putative S-adenosylmethionine-dependent methyltransferase, YraL family Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WT99_9BURK
tetrapyrrole methylase family protein
anamox1_curated_scaffold_769_12
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12268..12654
DNA (387bp) protein (129aa)
UPF0102 protein RGE_00730 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK81_RUBGI
hypothetical protein
UPF0102 protein RGE_00730 {ECO:0000256|HAMAP-Rule:MF_00048}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_769_13
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12726..13268
DNA (543bp) protein (181aa)
gmhA; phosphoheptose isomerase (EC:5.3.1.-)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI0003691BE9
Phosphoheptose isomerase {ECO:0000313|EMBL:EHR68974.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_769_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13265..13888
DNA (624bp) protein (208aa)
Transport protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMW4_9BURK
Transport protein {ECO:0000313|EMBL:EGJ09682.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
transport-associated protein
anamox1_curated_scaffold_769_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14069..14968)
DNA (900bp) protein (300aa)
garR; 2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTA3_9BURK
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:EHR68976.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_769_16
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15007..16209)
DNA (1203bp) protein (401aa)
Twitching motility protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMW6_9BURK
Twitching motility protein {ECO:0000313|EMBL:EGJ09684.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
pilU; twitching motility protein PilU
anamox1_curated_scaffold_769_17
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16218..17267)
DNA (1050bp) protein (350aa)
Twitching motility protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMW8_9BURK
Twitching motility protein {ECO:0000313|EMBL:EGJ09686.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
pilT; twitching motility protein PilT
anamox1_curated_scaffold_769_18
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17336..18043
DNA (708bp) protein (236aa)
Alanine racemase domain protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMW9_9BURK
Alanine racemase domain protein {ECO:0000313|EMBL:EGJ09687.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
alanine racemase domain-containing protein
anamox1_curated_scaffold_769_19
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18069..18935)
DNA (867bp) protein (289aa)
Thioredoxin Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMX3_9BURK
thioredoxin domain-containing protein
Thioredoxin {ECO:0000313|EMBL:EGJ09691.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_769_20
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19068..19877
DNA (810bp) protein (270aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMY9_9BURK
anamox1_curated_scaffold_769_21
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19980..21608
DNA (1629bp) protein (543aa)
Peptide chain release factor 3 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMY1_9BURK
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
prfC; peptide chain release factor RF-3 PrfC
anamox1_curated_scaffold_769_22
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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21736..21999
DNA (264bp) protein (88aa)
hypothetical protein Tax=Acidovorax sp. MR-S7 RepID=UPI00037F2C8E
Uncharacterized protein {ECO:0000313|EMBL:GAD24081.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
CopG family transcriptional regulator
anamox1_curated_scaffold_769_23
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21980..22462
DNA (483bp) protein (161aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein Tax=Acidovorax sp. MR-S7 RepID=UPI00036DDBC9
putative nucleic acid-binding protein, contains PIN domain
anamox1_curated_scaffold_769_24
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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22586..23494
DNA (909bp) protein (303aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00210629}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00272707};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
ubiA; 4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-)
4-hydroxybenzoate octaprenyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTB7_9BURK
anamox1_curated_scaffold_769_25
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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23558..24511
DNA (954bp) protein (318aa)
TRAP transporter solute receptor, TAXI family Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIE2_9BURK
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:EHR71762.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
TRAP transporter solute receptor, TAXI family precursor
anamox1_curated_scaffold_769_26
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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24606..26795
DNA (2190bp) protein (730aa)
TRAP transporter, 4TM/12TM fusion protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIE1_9BURK
TRAP transporter, 4TM/12TM fusion family protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_769_27
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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26792..27430
DNA (639bp) protein (213aa)
FMN-binding negative transcriptional regulator Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y573_LEPCP
FMN-binding negative transcriptional regulator
FMN-binding negative transcriptional regulator {ECO:0000313|EMBL:ACB32303.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_769_28
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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27609..27869
DNA (261bp) protein (87aa)
hypothetical protein Tax=Curvibacter lanceolatus RepID=UPI00037ABF75
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACB32304.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_769_29
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(27900..28820)
DNA (921bp) protein (307aa)
LysR family transcriptional regulator Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMX7_9BURK
oxyR; DNA-binding transcriptional regulator OxyR
LysR family transcriptional regulator {ECO:0000313|EMBL:EGJ09695.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_769_30
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28852..30945)
DNA (2094bp) protein (698aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.4.12)
ATP-dependent DNA helicase RecG Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMZ0_9BURK
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EGJ09708.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
Displaying items 1-30 of 53 in total

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