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NECEvent2014_2_2_Actinomyces_HPA0247-rel_65_243_partial

NECEvent2014_2_2_Actinomyces_sp__HPA0247_65_260
In projects: NECEvent2014_2_2

Consensus taxonomy: Actinomyces sp. HPA0247  →  Actinomyces  →  Actinomycetales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Description

gyrA is same as in 172_003

Displaying items 101-150 of 244 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_2_2_scaffold_86 172_002_scaffold_86
Species: Actinomyces sp. HPA0247 (92.31%)
39 44463 bp 63.88 249.70 93.34
NECEvent2014_2_2_scaffold_176 172_002_scaffold_176
Species: Actinomyces sp. HPA0247 (85.71%)
21 25705 bp 63.66 249.77 93.44
NECEvent2014_2_2_scaffold_327 172_002_scaffold_327
Species: Actinomyces sp. HPA0247 (100%)
12 13667 bp 61.84 249.91 91.58
NECEvent2014_2_2_scaffold_113 172_002_scaffold_113
Species: Actinomyces sp. HPA0247 (93.1%)
29 41747 bp 68.28 250.68 90.67
NECEvent2014_2_2_scaffold_158 172_002_scaffold_158
Species: Actinomyces sp. HPA0247 (78.95%)
19 32679 bp 67.56 250.96 81.99
NECEvent2014_2_2_scaffold_476 172_002_scaffold_476
Species: Actinomyces sp. HPA0247 (77.78%)
18 16923 bp 64.16 251.02 90.73
NECEvent2014_2_2_scaffold_331 172_002_scaffold_331
Species: Actinomyces sp. HPA0247 (92.86%)
14 14544 bp 64.23 251.54 91.83
NECEvent2014_2_2_scaffold_550 172_002_scaffold_550
Species: Actinomyces sp. HPA0247 (100%)
10 6984 bp 63.70 251.55 98.67
NECEvent2014_2_2_scaffold_1214 172_002_scaffold_1214
Species: Actinomyces sp. HPA0247 (66.67%)
6 5465 bp 61.24 251.69 81.02
NECEvent2014_2_2_scaffold_926 172_002_scaffold_926
Species: Actinomyces sp. HPA0247 (66.67%)
3 2980 bp 60.67 251.73 52.15
NECEvent2014_2_2_scaffold_1387 172_002_scaffold_1387
Species: Actinomyces sp. HPA0247 (60%)
5 4255 bp 66.77 251.77 89.54
NECEvent2014_2_2_scaffold_846 172_002_scaffold_846
Species: Actinomyces sp. HPA0247 (75%)
4 3405 bp 66.64 251.81 94.01
NECEvent2014_2_2_scaffold_369 172_002_scaffold_369
Species: Actinomyces sp. HPA0247 (62.5%)
8 13360 bp 65.73 252.44 88.59
NECEvent2014_2_2_scaffold_140 172_002_scaffold_140
Species: Actinomyces sp. HPA0247 (86.84%)
38 46633 bp 64.02 252.50 94.01
NECEvent2014_2_2_scaffold_612 172_002_scaffold_612
Genus: Actinomyces (100%)
12 11937 bp 66.90 252.66 91.08
NECEvent2014_2_2_scaffold_307 172_002_scaffold_307
Species: Actinomyces sp. HPA0247 (92.31%)
13 16146 bp 66.86 252.73 96.47
NECEvent2014_2_2_scaffold_804 172_002_scaffold_804
Species: Actinomyces sp. HPA0247 (100%)
2 3602 bp 65.32 252.78 87.53
NECEvent2014_2_2_scaffold_178 172_002_scaffold_178
Species: Actinomyces sp. HPA0247 (50%)
18 25561 bp 67.67 252.98 81.64
NECEvent2014_2_2_scaffold_32 172_002_scaffold_32
Species: Actinomyces sp. HPA0247 (92.68%)
82 87298 bp 63.31 253.70 95.27
NECEvent2014_2_2_scaffold_356 172_002_scaffold_356
Species: Actinomyces sp. HPA0247 (91.67%)
12 12180 bp 65.08 253.78 92.76
NECEvent2014_2_2_scaffold_222 172_002_scaffold_222
Species: Actinomyces sp. HPA0247 (100%)
31 32869 bp 64.62 253.83 91.65
NECEvent2014_2_2_scaffold_795 172_002_scaffold_795
Species: Actinomyces sp. HPA0247 (100%)
5 3630 bp 67.13 254.30 88.18
NECEvent2014_2_2_scaffold_420 172_002_scaffold_420
Species: Actinomyces sp. HPA0247 (78.57%)
14 9751 bp 64.28 254.50 95.19
NECEvent2014_2_2_scaffold_525 172_002_scaffold_525
Species: Actinomyces sp. HPA0247 (85.71%)
7 9078 bp 64.76 254.54 83.97
NECEvent2014_2_2_scaffold_1240 172_002_scaffold_1240
Species: Actinomyces sp. HPA0247 (100%)
3 2726 bp 65.48 254.55 77.04
NECEvent2014_2_2_scaffold_799 172_002_scaffold_799
Species: Actinomyces sp. HPA0247 (100%)
6 3622 bp 64.44 254.90 92.60
NECEvent2014_2_2_scaffold_372 172_002_scaffold_372
Species: Actinomyces sp. HPA0247 (75%)
16 15609 bp 64.13 254.93 88.31
NECEvent2014_2_2_scaffold_878 172_002_scaffold_878
Species: Actinomyces sp. HPA0247 (100%)
2 3252 bp 65.62 254.94 94.10
NECEvent2014_2_2_scaffold_155 172_002_scaffold_155
Species: Actinomyces sp. HPA0247 (90.91%)
22 33869 bp 66.13 255.95 89.01
NECEvent2014_2_2_scaffold_423 172_002_scaffold_423
Species: Actinomyces sp. HPA0247 (90%)
10 9972 bp 62.78 256.14 95.19
NECEvent2014_2_2_scaffold_647 172_002_scaffold_647
Species: Actinomyces sp. HPA0247 (100%)
7 5345 bp 65.46 256.30 84.08
NECEvent2014_2_2_scaffold_732 172_002_scaffold_732
Species: Actinomyces sp. HPA0247 (80%)
5 4844 bp 65.61 256.46 94.45
NECEvent2014_2_2_scaffold_594 172_002_scaffold_594
Species: Actinomyces sp. HPA0247 (85.71%)
7 5479 bp 63.61 256.55 94.40
NECEvent2014_2_2_scaffold_293 172_002_scaffold_293
Species: Actinomyces sp. HPA0247 (100%)
11 15139 bp 66.03 256.86 85.43
NECEvent2014_2_2_scaffold_126 172_002_scaffold_126
Species: Actinomyces sp. HPA0247 (77.78%)
27 32653 bp 65.43 257.20 79.28
NECEvent2014_2_2_scaffold_395 172_002_scaffold_395
Species: Actinomyces sp. HPA0247 (76.92%)
13 11890 bp 68.74 257.25 90.15
NECEvent2014_2_2_scaffold_258 172_002_scaffold_258
Species: Actinomyces sp. HPA0247 (94.12%)
17 18164 bp 65.33 257.59 89.78
NECEvent2014_2_2_scaffold_953 172_002_scaffold_953
Species: Actinomyces sp. HPA0247 (100%)
3 2853 bp 66.70 257.99 94.53
NECEvent2014_2_2_scaffold_607 172_002_scaffold_607
Species: Actinomyces sp. HPA0247 (75%)
4 5314 bp 66.22 258.11 73.28
NECEvent2014_2_2_scaffold_556 172_002_scaffold_556
Species: Actinomyces sp. HPA0247 (100%)
9 6019 bp 64.35 258.33 90.21
NECEvent2014_2_2_scaffold_173 172_002_scaffold_173
Species: Actinomyces sp. HPA0247 (80.95%)
21 25925 bp 65.35 258.53 88.68
NECEvent2014_2_2_scaffold_264 172_002_scaffold_264
Species: Actinomyces sp. HPA0247 (88.89%)
27 27592 bp 64.17 258.83 87.63
NECEvent2014_2_2_scaffold_257 172_002_scaffold_257
Species: Actinomyces sp. HPA0247 (50%)
12 28846 bp 65.46 258.98 82.73
NECEvent2014_2_2_scaffold_1239 172_002_scaffold_1239
Species: Actinomyces sp. HPA0247 (66.67%)
3 3180 bp 65.53 259.39 75.00
NECEvent2014_2_2_scaffold_373 172_002_scaffold_373
Species: Actinomyces sp. HPA0247 (100%)
8 11562 bp 67.95 259.95 80.67
NECEvent2014_2_2_scaffold_335 172_002_scaffold_335
Species: Actinomyces sp. HPA0247 (66.67%)
12 14125 bp 61.91 260.13 79.88
NECEvent2014_2_2_scaffold_735 172_002_scaffold_735
Species: Actinomyces sp. HPA0247 (100%)
4 5491 bp 67.31 260.14 83.86
NECEvent2014_2_2_scaffold_2037 172_002_scaffold_2037
Species: Actinomyces sp. HPA0247 (75%)
4 1910 bp 54.82 260.34 103.98
NECEvent2014_2_2_scaffold_2619 172_002_scaffold_2619
Species: Actinomyces sp. HPA0247 (100%)
1 1029 bp 67.44 260.50 100.00
NECEvent2014_2_2_scaffold_316 172_002_scaffold_316
Species: Actinomyces sp. HPA0247 (86.67%)
15 15900 bp 67.97 260.58 84.26
Displaying items 101-150 of 244 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.