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NECEvent2014_2_2_Actinomyces_HPA0247-rel_65_243_partial

NECEvent2014_2_2_Actinomyces_sp__HPA0247_65_260
In projects: NECEvent2014_2_2

Consensus taxonomy: Actinomyces sp. HPA0247  →  Actinomyces  →  Actinomycetales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Description

gyrA is same as in 172_003

Displaying items 151-200 of 244 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_2_2_scaffold_125 172_002_scaffold_125
Species: Actinomyces sp. HPA0247 (88.24%)
34 37344 bp 64.22 260.65 90.01
NECEvent2014_2_2_scaffold_1075 172_002_scaffold_1075
Genus: Actinomyces (100%)
5 5814 bp 67.23 261.40 84.16
NECEvent2014_2_2_scaffold_1311 172_002_scaffold_1311
Species: Actinomyces sp. HPA0247 (100%)
6 4471 bp 67.03 261.55 89.04
NECEvent2014_2_2_scaffold_954 172_002_scaffold_954
Species: Actinomyces sp. HPA0247 (66.67%)
3 2840 bp 60.81 261.65 86.73
NECEvent2014_2_2_scaffold_124 172_002_scaffold_124
Species: Actinomyces sp. HPA0247 (69.35%)
62 63940 bp 65.80 261.75 88.68
NECEvent2014_2_2_scaffold_2074 172_002_scaffold_2074
Species: Actinomyces sp. HPA0247 (100%)
2 1758 bp 72.87 261.77 95.05
NECEvent2014_2_2_scaffold_601 172_002_scaffold_601
Species: Actinomyces sp. HPA0247 (90.91%)
11 20898 bp 65.30 262.11 82.28
NECEvent2014_2_2_scaffold_129 172_002_scaffold_129
Species: Actinomyces sp. HPA0247 (86.67%)
30 32993 bp 65.16 262.52 85.72
NECEvent2014_2_2_scaffold_1804 172_002_scaffold_1804
Species: Actinomyces odontolyticus (50%)
2 1439 bp 70.88 262.89 87.77
NECEvent2014_2_2_scaffold_284 172_002_scaffold_284
Species: Actinomyces sp. HPA0247 (68.18%)
22 20409 bp 65.24 263.03 75.21
NECEvent2014_2_2_scaffold_1683 172_002_scaffold_1683
Species: Actinomyces sp. HPA0247 (100%)
2 2185 bp 68.42 263.27 100.09
NECEvent2014_2_2_scaffold_2745 172_002_scaffold_2745
Species: Actinomyces sp. HPA0247 (100%)
4 1442 bp 65.60 263.38 81.55
NECEvent2014_2_2_scaffold_2386 172_002_scaffold_2386
Species: Actinomyces sp. HPA0247 (100%)
1 1107 bp 72.00 263.41 99.73
NECEvent2014_2_2_scaffold_2146 172_002_scaffold_2146
Species: Actinomyces sp. HPA0247 (100%)
2 1223 bp 69.75 264.19 94.44
NECEvent2014_2_2_scaffold_973 172_002_scaffold_973
Species: Actinomyces sp. HPA0247 (100%)
2 2780 bp 66.37 264.50 93.13
NECEvent2014_2_2_scaffold_68 172_002_scaffold_68
Species: Actinomyces sp. HPA0247 (82.5%)
40 54149 bp 66.54 264.80 86.72
NECEvent2014_2_2_scaffold_1086 172_002_scaffold_1086
Species: Actinomyces sp. HPA0247 (100%)
3 2462 bp 61.05 265.03 95.65
NECEvent2014_2_2_scaffold_249 172_002_scaffold_249
Genus: Actinomyces (93.75%)
16 22795 bp 59.27 265.30 76.78
NECEvent2014_2_2_scaffold_268 172_002_scaffold_268
Species: Actinomyces sp. HPA0247 (92.31%)
26 31018 bp 65.99 265.47 88.52
NECEvent2014_2_2_scaffold_2291 172_002_scaffold_2291
Species: Actinomyces odontolyticus (50%)
2 1624 bp 62.19 265.64 79.43
NECEvent2014_2_2_scaffold_2044 172_002_scaffold_2044
Species: Actinomyces sp. HPA0247 (100%)
4 1961 bp 68.79 266.19 86.74
NECEvent2014_2_2_scaffold_1465 172_002_scaffold_1465
Species: Actinomyces sp. HPA0247 (100%)
4 3267 bp 67.22 266.21 94.31
NECEvent2014_2_2_scaffold_2092 172_002_scaffold_2092
Species: Actinomyces sp. HPA0247 (100%)
6 3318 bp 58.71 266.50 94.21
NECEvent2014_2_2_scaffold_1114 172_002_scaffold_1114
Species: Actinomyces sp. HPA0247 (75%)
4 2399 bp 65.15 266.80 89.29
NECEvent2014_2_2_scaffold_244 172_002_scaffold_244
Species: Actinomyces sp. HPA0247 (86.96%)
23 31066 bp 66.72 266.83 88.51
NECEvent2014_2_2_scaffold_797 172_002_scaffold_797
Species: Actinomyces sp. HPA0247 (60%)
10 9695 bp 67.06 267.11 82.34
NECEvent2014_2_2_scaffold_411 172_002_scaffold_411
Species: Actinomyces sp. HPA0247 (66.67%)
21 13901 bp 61.05 267.34 86.35
NECEvent2014_2_2_scaffold_417 172_002_scaffold_417
Species: Actinomyces sp. HPA0247 (87.5%)
8 10031 bp 66.58 267.69 72.88
NECEvent2014_2_2_scaffold_1011 172_002_scaffold_1011
Species: Actinomyces sp. oral taxon 180 (100%)
1 2668 bp 60.61 268.18 99.96
NECEvent2014_2_2_scaffold_641 172_002_scaffold_641
Species: Actinomyces sp. HPA0247 (100%)
7 13375 bp 68.20 268.50 94.21
NECEvent2014_2_2_scaffold_97 172_002_scaffold_97
Species: Actinomyces sp. HPA0247 (61.7%)
47 49405 bp 65.98 268.73 85.99
NECEvent2014_2_2_scaffold_650 172_002_scaffold_650
Species: Actinomyces sp. HPA0247 (83.33%)
6 4806 bp 64.34 268.79 90.32
NECEvent2014_2_2_scaffold_1070 172_002_scaffold_1070
Species: Actinomyces sp. HPA0247 (100%)
5 3317 bp 69.61 268.93 87.55
NECEvent2014_2_2_scaffold_237 172_002_scaffold_237
Genus: Actinomyces (90%)
20 19840 bp 63.82 269.86 78.83
NECEvent2014_2_2_scaffold_835 172_002_scaffold_835
Species: Actinomyces sp. HPA0247 (50%)
4 5334 bp 60.82 270.47 80.82
NECEvent2014_2_2_scaffold_1172 172_002_scaffold_1172
Species: Actinomyces sp. HPA0247 (100%)
4 3926 bp 68.08 272.15 96.05
NECEvent2014_2_2_scaffold_630 172_002_scaffold_630
Species: Actinomyces sp. HPA0247 (75%)
4 5049 bp 70.79 272.58 99.58
NECEvent2014_2_2_scaffold_216 172_002_scaffold_216
Species: Actinomyces sp. HPA0247 (73.91%)
23 21189 bp 62.55 273.80 93.11
NECEvent2014_2_2_scaffold_256 172_002_scaffold_256
Species: Actinomyces sp. HPA0247 (78.57%)
42 49971 bp 66.35 274.03 86.72
NECEvent2014_2_2_scaffold_1711 172_002_scaffold_1711
Species: Actinomyces sp. HPA0247 (100%)
1 1513 bp 66.62 274.12 87.84
NECEvent2014_2_2_scaffold_1724 172_002_scaffold_1724
Species: Actinomyces sp. HPA0247 (100%)
5 3086 bp 69.02 274.97 98.87
NECEvent2014_2_2_scaffold_334 172_002_scaffold_334
Species: Actinomyces sp. HPA0247 (62.5%)
16 19030 bp 66.38 275.13 88.34
NECEvent2014_2_2_scaffold_364 172_002_scaffold_364
Species: Actinomyces sp. HPA0247 (61.54%)
13 11356 bp 64.64 275.27 81.95
NECEvent2014_2_2_scaffold_1306 172_002_scaffold_1306
Species: Actinomyces sp. HPA0247 (100%)
2 1986 bp 63.70 275.60 89.88
NECEvent2014_2_2_scaffold_1616 172_002_scaffold_1616
Species: Actinomyces sp. ICM54 (100%)
1 1596 bp 66.42 279.61 99.81
NECEvent2014_2_2_scaffold_1006 172_002_scaffold_1006
Species: Actinomyces sp. HPA0247 (100%)
6 3808 bp 64.13 280.46 85.64
NECEvent2014_2_2_scaffold_982 172_002_scaffold_982
Species: Actinomyces sp. HPA0247 (66.67%)
3 2752 bp 65.99 280.87 98.00
NECEvent2014_2_2_scaffold_743 172_002_scaffold_743
Species: Actinomyces sp. HPA0247 (85.71%)
7 5366 bp 63.25 281.72 77.69
NECEvent2014_2_2_scaffold_473 172_002_scaffold_473
Species: Actinomyces sp. HPA0247 (100%)
9 10593 bp 65.85 282.10 90.17
NECEvent2014_2_2_scaffold_1031 172_002_scaffold_1031
Species: Actinomyces sp. HPA0247 (100%)
3 2603 bp 62.39 283.81 96.00
Displaying items 151-200 of 244 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.